Protein–RNA interactions for Protein: J3QMK1

Sgo2b, Shugoshin 2B, mousemouse

Predictions only

Length 1,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgo2bJ3QMK1 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sgo2bJ3QMK1 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.72■□□□□ 0.27
Sgo2bJ3QMK1 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
Sgo2bJ3QMK1 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Sgo2bJ3QMK1 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.72■□□□□ 0.27
Sgo2bJ3QMK1 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sgo2bJ3QMK1 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sgo2bJ3QMK1 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Sgo2bJ3QMK1 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Sgo2bJ3QMK1 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sgo2bJ3QMK1 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Sgo2bJ3QMK1 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sgo2bJ3QMK1 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sgo2bJ3QMK1 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Sgo2bJ3QMK1 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sgo2bJ3QMK1 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Sgo2bJ3QMK1 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sgo2bJ3QMK1 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Sgo2bJ3QMK1 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sgo2bJ3QMK1 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sgo2bJ3QMK1 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sgo2bJ3QMK1 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sgo2bJ3QMK1 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sgo2bJ3QMK1 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.71■□□□□ 0.27
Sgo2bJ3QMK1 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.71■□□□□ 0.27
Sgo2bJ3QMK1 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sgo2bJ3QMK1 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Sgo2bJ3QMK1 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sgo2bJ3QMK1 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sgo2bJ3QMK1 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Sgo2bJ3QMK1 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Sgo2bJ3QMK1 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Sgo2bJ3QMK1 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sgo2bJ3QMK1 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sgo2bJ3QMK1 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sgo2bJ3QMK1 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Sgo2bJ3QMK1 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sgo2bJ3QMK1 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sgo2bJ3QMK1 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sgo2bJ3QMK1 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sgo2bJ3QMK1 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sgo2bJ3QMK1 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sgo2bJ3QMK1 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sgo2bJ3QMK1 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.7■□□□□ 0.26
Sgo2bJ3QMK1 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.7■□□□□ 0.26
Sgo2bJ3QMK1 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.7■□□□□ 0.26
Sgo2bJ3QMK1 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sgo2bJ3QMK1 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sgo2bJ3QMK1 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sgo2bJ3QMK1 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sgo2bJ3QMK1 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sgo2bJ3QMK1 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sgo2bJ3QMK1 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sgo2bJ3QMK1 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sgo2bJ3QMK1 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sgo2bJ3QMK1 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Sgo2bJ3QMK1 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Sgo2bJ3QMK1 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sgo2bJ3QMK1 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sgo2bJ3QMK1 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sgo2bJ3QMK1 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sgo2bJ3QMK1 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sgo2bJ3QMK1 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sgo2bJ3QMK1 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sgo2bJ3QMK1 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sgo2bJ3QMK1 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sgo2bJ3QMK1 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sgo2bJ3QMK1 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Sgo2bJ3QMK1 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.69■□□□□ 0.26
Sgo2bJ3QMK1 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.69■□□□□ 0.26
Sgo2bJ3QMK1 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sgo2bJ3QMK1 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sgo2bJ3QMK1 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sgo2bJ3QMK1 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sgo2bJ3QMK1 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sgo2bJ3QMK1 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sgo2bJ3QMK1 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sgo2bJ3QMK1 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sgo2bJ3QMK1 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Sgo2bJ3QMK1 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Sgo2bJ3QMK1 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.68■□□□□ 0.26
Sgo2bJ3QMK1 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sgo2bJ3QMK1 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sgo2bJ3QMK1 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sgo2bJ3QMK1 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sgo2bJ3QMK1 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sgo2bJ3QMK1 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sgo2bJ3QMK1 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sgo2bJ3QMK1 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sgo2bJ3QMK1 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sgo2bJ3QMK1 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sgo2bJ3QMK1 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sgo2bJ3QMK1 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.68■□□□□ 0.26
Sgo2bJ3QMK1 Gm27463-201ENSMUST00000183569 57 ntBASIC16.68■□□□□ 0.26
Sgo2bJ3QMK1 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.68■□□□□ 0.26
Sgo2bJ3QMK1 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.68■□□□□ 0.26
Sgo2bJ3QMK1 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Sgo2bJ3QMK1 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sgo2bJ3QMK1 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sgo2bJ3QMK1 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms