Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh1F7BJK1 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh1F7BJK1 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC15.12■□□□□ 0.01
Pcdh1F7BJK1 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh1F7BJK1 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh1F7BJK1 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Pcdh1F7BJK1 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh1F7BJK1 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh1F7BJK1 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.12■□□□□ 0.01
Pcdh1F7BJK1 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Pcdh1F7BJK1 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh1F7BJK1 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Pcdh1F7BJK1 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh1F7BJK1 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh1F7BJK1 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh1F7BJK1 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
Pcdh1F7BJK1 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh1F7BJK1 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh1F7BJK1 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh1F7BJK1 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh1F7BJK1 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Pcdh1F7BJK1 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh1F7BJK1 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh1F7BJK1 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Pcdh1F7BJK1 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh1F7BJK1 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh1F7BJK1 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh1F7BJK1 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh1F7BJK1 Gm12896-201ENSMUST00000118430 226 ntBASIC15.11■□□□□ 0.01
Pcdh1F7BJK1 Gm24841-201ENSMUST00000158676 357 ntBASIC15.11■□□□□ 0.01
Pcdh1F7BJK1 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC15.11■□□□□ 0.01
Pcdh1F7BJK1 Gm42545-201ENSMUST00000202755 922 ntBASIC15.11■□□□□ 0.01
Pcdh1F7BJK1 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh1F7BJK1 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC15.11■□□□□ 0.01
Pcdh1F7BJK1 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh1F7BJK1 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh1F7BJK1 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh1F7BJK1 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Pcdh1F7BJK1 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh1F7BJK1 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Pcdh1F7BJK1 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh1F7BJK1 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh1F7BJK1 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh1F7BJK1 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh1F7BJK1 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh1F7BJK1 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh1F7BJK1 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh1F7BJK1 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh1F7BJK1 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.1■□□□□ 0.01
Pcdh1F7BJK1 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.1■□□□□ 0.01
Pcdh1F7BJK1 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Pcdh1F7BJK1 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh1F7BJK1 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh1F7BJK1 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh1F7BJK1 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC15.1■□□□□ 0.01
Pcdh1F7BJK1 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh1F7BJK1 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh1F7BJK1 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.1■□□□□ 0.01
Pcdh1F7BJK1 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Pcdh1F7BJK1 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Pcdh1F7BJK1 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh1F7BJK1 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh1F7BJK1 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh1F7BJK1 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh1F7BJK1 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh1F7BJK1 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh1F7BJK1 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh1F7BJK1 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh1F7BJK1 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh1F7BJK1 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh1F7BJK1 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh1F7BJK1 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh1F7BJK1 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Pcdh1F7BJK1 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh1F7BJK1 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh1F7BJK1 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh1F7BJK1 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.09■□□□□ 0.01
Pcdh1F7BJK1 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh1F7BJK1 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh1F7BJK1 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh1F7BJK1 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh1F7BJK1 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh1F7BJK1 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh1F7BJK1 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh1F7BJK1 Gm37292-201ENSMUST00000192062 758 ntBASIC15.09■□□□□ 0.01
Pcdh1F7BJK1 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC15.09■□□□□ 0.01
Pcdh1F7BJK1 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh1F7BJK1 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC15.09■□□□□ 0.01
Pcdh1F7BJK1 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh1F7BJK1 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Pcdh1F7BJK1 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh1F7BJK1 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh1F7BJK1 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh1F7BJK1 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Pcdh1F7BJK1 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.09■□□□□ 0.01
Pcdh1F7BJK1 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh1F7BJK1 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Pcdh1F7BJK1 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh1F7BJK1 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
Pcdh1F7BJK1 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms