Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
Pcdh17E9PXF0 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh17E9PXF0 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.6■□□□□ 0.09
Pcdh17E9PXF0 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh17E9PXF0 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh17E9PXF0 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh17E9PXF0 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh17E9PXF0 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh17E9PXF0 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh17E9PXF0 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh17E9PXF0 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh17E9PXF0 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh17E9PXF0 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh17E9PXF0 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh17E9PXF0 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh17E9PXF0 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh17E9PXF0 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.59■□□□□ 0.09
Pcdh17E9PXF0 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh17E9PXF0 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh17E9PXF0 Mir770-201ENSMUST00000103252 94 ntBASIC15.59■□□□□ 0.09
Pcdh17E9PXF0 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.59■□□□□ 0.09
Pcdh17E9PXF0 Gm17807-201ENSMUST00000186869 298 ntBASIC15.59■□□□□ 0.09
Pcdh17E9PXF0 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh17E9PXF0 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh17E9PXF0 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh17E9PXF0 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh17E9PXF0 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh17E9PXF0 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh17E9PXF0 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh17E9PXF0 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh17E9PXF0 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Pcdh17E9PXF0 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh17E9PXF0 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh17E9PXF0 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdh17E9PXF0 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
Pcdh17E9PXF0 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdh17E9PXF0 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.58■□□□□ 0.08
Pcdh17E9PXF0 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Pcdh17E9PXF0 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh17E9PXF0 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
Pcdh17E9PXF0 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh17E9PXF0 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh17E9PXF0 Gm6623-201ENSMUST00000173570 544 ntBASIC15.58■□□□□ 0.08
Pcdh17E9PXF0 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.58■□□□□ 0.08
Pcdh17E9PXF0 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh17E9PXF0 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh17E9PXF0 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh17E9PXF0 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh17E9PXF0 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh17E9PXF0 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh17E9PXF0 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh17E9PXF0 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh17E9PXF0 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh17E9PXF0 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh17E9PXF0 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh17E9PXF0 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.57■□□□□ 0.08
Pcdh17E9PXF0 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Pcdh17E9PXF0 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Pcdh17E9PXF0 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh17E9PXF0 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.57■□□□□ 0.08
Pcdh17E9PXF0 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.57■□□□□ 0.08
Pcdh17E9PXF0 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Pcdh17E9PXF0 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Pcdh17E9PXF0 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.57■□□□□ 0.08
Pcdh17E9PXF0 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.57■□□□□ 0.08
Pcdh17E9PXF0 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh17E9PXF0 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh17E9PXF0 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Pcdh17E9PXF0 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh17E9PXF0 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh17E9PXF0 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh17E9PXF0 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
Pcdh17E9PXF0 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Pcdh17E9PXF0 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh17E9PXF0 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Pcdh17E9PXF0 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh17E9PXF0 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.57■□□□□ 0.08
Pcdh17E9PXF0 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh17E9PXF0 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh17E9PXF0 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.56■□□□□ 0.08
Pcdh17E9PXF0 Gm28033-201ENSMUST00000184224 96 ntBASIC15.56■□□□□ 0.08
Pcdh17E9PXF0 Gm17971-201ENSMUST00000190239 806 ntBASIC15.56■□□□□ 0.08
Pcdh17E9PXF0 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh17E9PXF0 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh17E9PXF0 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh17E9PXF0 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh17E9PXF0 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Pcdh17E9PXF0 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh17E9PXF0 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh17E9PXF0 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh17E9PXF0 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh17E9PXF0 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh17E9PXF0 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
Pcdh17E9PXF0 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.55■□□□□ 0.08
Pcdh17E9PXF0 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh17E9PXF0 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh17E9PXF0 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh17E9PXF0 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh17E9PXF0 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Pcdh17E9PXF0 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms