Protein–RNA interactions for Protein: E9PUB3

Gm5878, Predicted gene 5878, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5878E9PUB3 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm5878E9PUB3 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Gm5878E9PUB3 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
Gm5878E9PUB3 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Gm5878E9PUB3 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm5878E9PUB3 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm5878E9PUB3 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Gm5878E9PUB3 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Gm5878E9PUB3 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Gm5878E9PUB3 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC12.59□□□□□ -0.39
Gm5878E9PUB3 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC12.59□□□□□ -0.39
Gm5878E9PUB3 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC12.59□□□□□ -0.39
Gm5878E9PUB3 Timm23-208ENSMUST00000226683 750 ntBASIC12.59□□□□□ -0.39
Gm5878E9PUB3 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm5878E9PUB3 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC12.59□□□□□ -0.39
Gm5878E9PUB3 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm5878E9PUB3 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm5878E9PUB3 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Gm5878E9PUB3 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC12.59□□□□□ -0.39
Gm5878E9PUB3 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm5878E9PUB3 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Gm5878E9PUB3 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC12.59□□□□□ -0.39
Gm5878E9PUB3 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm5878E9PUB3 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Gm5878E9PUB3 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm5878E9PUB3 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Gm5878E9PUB3 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm5878E9PUB3 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm5878E9PUB3 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Gm5878E9PUB3 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm5878E9PUB3 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm5878E9PUB3 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm5878E9PUB3 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm5878E9PUB3 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Gm5878E9PUB3 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm5878E9PUB3 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Gm5878E9PUB3 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Gm5878E9PUB3 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm5878E9PUB3 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm5878E9PUB3 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm5878E9PUB3 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm5878E9PUB3 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Gm5878E9PUB3 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm5878E9PUB3 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm5878E9PUB3 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Gm5878E9PUB3 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC12.58□□□□□ -0.4
Gm5878E9PUB3 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC12.58□□□□□ -0.4
Gm5878E9PUB3 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm5878E9PUB3 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm5878E9PUB3 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm5878E9PUB3 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm5878E9PUB3 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm5878E9PUB3 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Gm5878E9PUB3 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Gm5878E9PUB3 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm5878E9PUB3 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Gm5878E9PUB3 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm5878E9PUB3 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm5878E9PUB3 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Gm5878E9PUB3 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm5878E9PUB3 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Gm5878E9PUB3 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm5878E9PUB3 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm5878E9PUB3 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm5878E9PUB3 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Gm5878E9PUB3 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm5878E9PUB3 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm5878E9PUB3 Gm20628-201ENSMUST00000177363 3215 ntBASIC12.57□□□□□ -0.4
Gm5878E9PUB3 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm5878E9PUB3 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gm5878E9PUB3 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gm5878E9PUB3 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gm5878E9PUB3 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm5878E9PUB3 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gm5878E9PUB3 Odf3b-204ENSMUST00000227834 930 ntBASIC12.57□□□□□ -0.4
Gm5878E9PUB3 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Gm5878E9PUB3 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm5878E9PUB3 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm5878E9PUB3 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm5878E9PUB3 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC12.57□□□□□ -0.4
Gm5878E9PUB3 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm5878E9PUB3 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gm5878E9PUB3 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm5878E9PUB3 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm5878E9PUB3 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm5878E9PUB3 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gm5878E9PUB3 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Gm5878E9PUB3 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm5878E9PUB3 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gm5878E9PUB3 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm5878E9PUB3 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm5878E9PUB3 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm5878E9PUB3 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gm5878E9PUB3 AC115863.1-201ENSMUST00000214815 1813 ntBASIC12.56□□□□□ -0.4
Gm5878E9PUB3 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm5878E9PUB3 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm5878E9PUB3 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm5878E9PUB3 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm5878E9PUB3 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gm5878E9PUB3 Gm18958-201ENSMUST00000174258 762 ntBASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms