Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm6627-201ENSMUST00000218299 2386 ntBASIC14.98□□□□□ -0.01
Shank1D3YZU1 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shank1D3YZU1 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shank1D3YZU1 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shank1D3YZU1 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shank1D3YZU1 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Shank1D3YZU1 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shank1D3YZU1 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Shank1D3YZU1 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.98□□□□□ -0.01
Shank1D3YZU1 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shank1D3YZU1 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shank1D3YZU1 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shank1D3YZU1 Gm5112-201ENSMUST00000204407 2368 ntBASIC14.98□□□□□ -0.01
Shank1D3YZU1 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shank1D3YZU1 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Shank1D3YZU1 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shank1D3YZU1 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shank1D3YZU1 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Shank1D3YZU1 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shank1D3YZU1 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shank1D3YZU1 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Shank1D3YZU1 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Shank1D3YZU1 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shank1D3YZU1 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shank1D3YZU1 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shank1D3YZU1 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.97□□□□□ -0.01
Shank1D3YZU1 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Shank1D3YZU1 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.97□□□□□ -0.01
Shank1D3YZU1 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shank1D3YZU1 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shank1D3YZU1 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shank1D3YZU1 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shank1D3YZU1 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Shank1D3YZU1 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.97□□□□□ -0.01
Shank1D3YZU1 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shank1D3YZU1 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shank1D3YZU1 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shank1D3YZU1 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shank1D3YZU1 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Shank1D3YZU1 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Shank1D3YZU1 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.97□□□□□ -0.01
Shank1D3YZU1 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.97□□□□□ -0.01
Shank1D3YZU1 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shank1D3YZU1 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shank1D3YZU1 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Shank1D3YZU1 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shank1D3YZU1 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Shank1D3YZU1 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shank1D3YZU1 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shank1D3YZU1 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shank1D3YZU1 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shank1D3YZU1 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shank1D3YZU1 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC14.96□□□□□ -0.01
Shank1D3YZU1 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shank1D3YZU1 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shank1D3YZU1 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.96□□□□□ -0.01
Shank1D3YZU1 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shank1D3YZU1 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.96□□□□□ -0.01
Shank1D3YZU1 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
Shank1D3YZU1 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shank1D3YZU1 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shank1D3YZU1 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shank1D3YZU1 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Shank1D3YZU1 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shank1D3YZU1 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Shank1D3YZU1 Gm5953-201ENSMUST00000220644 2616 ntBASIC14.96□□□□□ -0.02
Shank1D3YZU1 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Shank1D3YZU1 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.95□□□□□ -0.02
Shank1D3YZU1 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shank1D3YZU1 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shank1D3YZU1 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shank1D3YZU1 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shank1D3YZU1 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shank1D3YZU1 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Shank1D3YZU1 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shank1D3YZU1 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shank1D3YZU1 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
Shank1D3YZU1 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Shank1D3YZU1 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Shank1D3YZU1 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Shank1D3YZU1 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
Shank1D3YZU1 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shank1D3YZU1 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Shank1D3YZU1 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shank1D3YZU1 Gm8000-201ENSMUST00000188378 592 ntBASIC14.95□□□□□ -0.02
Shank1D3YZU1 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shank1D3YZU1 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.95□□□□□ -0.02
Shank1D3YZU1 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Shank1D3YZU1 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shank1D3YZU1 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Shank1D3YZU1 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shank1D3YZU1 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shank1D3YZU1 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Shank1D3YZU1 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.94□□□□□ -0.02
Shank1D3YZU1 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.94□□□□□ -0.02
Shank1D3YZU1 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Shank1D3YZU1 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.94□□□□□ -0.02
Shank1D3YZU1 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Shank1D3YZU1 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Shank1D3YZU1 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms