Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Gm44486-201ENSMUST00000198508 138 ntBASIC19.4■□□□□ 0.7
Clrn2B2RVW2 Gm44454-201ENSMUST00000198541 138 ntBASIC19.4■□□□□ 0.7
Clrn2B2RVW2 Gm44314-201ENSMUST00000199263 138 ntBASIC19.4■□□□□ 0.7
Clrn2B2RVW2 Gm44394-201ENSMUST00000199558 138 ntBASIC19.4■□□□□ 0.7
Clrn2B2RVW2 Gm44484-201ENSMUST00000199873 138 ntBASIC19.4■□□□□ 0.7
Clrn2B2RVW2 Gm44466-201ENSMUST00000200264 138 ntBASIC19.4■□□□□ 0.7
Clrn2B2RVW2 Gm44359-201ENSMUST00000200671 138 ntBASIC19.4■□□□□ 0.7
Clrn2B2RVW2 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Clrn2B2RVW2 Gm9449-201ENSMUST00000207265 1011 ntBASIC19.4■□□□□ 0.7
Clrn2B2RVW2 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC19.4■□□□□ 0.7
Clrn2B2RVW2 Gm6376-201ENSMUST00000209407 580 ntBASIC19.4■□□□□ 0.7
Clrn2B2RVW2 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clrn2B2RVW2 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clrn2B2RVW2 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clrn2B2RVW2 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.4■□□□□ 0.7
Clrn2B2RVW2 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Clrn2B2RVW2 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.4■□□□□ 0.7
Clrn2B2RVW2 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clrn2B2RVW2 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
Clrn2B2RVW2 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clrn2B2RVW2 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Clrn2B2RVW2 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Clrn2B2RVW2 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Clrn2B2RVW2 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Clrn2B2RVW2 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Clrn2B2RVW2 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clrn2B2RVW2 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clrn2B2RVW2 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clrn2B2RVW2 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clrn2B2RVW2 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clrn2B2RVW2 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clrn2B2RVW2 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Clrn2B2RVW2 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Clrn2B2RVW2 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clrn2B2RVW2 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Clrn2B2RVW2 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Clrn2B2RVW2 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clrn2B2RVW2 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Clrn2B2RVW2 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Clrn2B2RVW2 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clrn2B2RVW2 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Clrn2B2RVW2 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clrn2B2RVW2 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clrn2B2RVW2 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Clrn2B2RVW2 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Clrn2B2RVW2 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clrn2B2RVW2 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clrn2B2RVW2 AL590614.2-201ENSMUST00000225374 1937 ntBASIC19.38■□□□□ 0.69
Clrn2B2RVW2 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clrn2B2RVW2 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clrn2B2RVW2 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clrn2B2RVW2 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clrn2B2RVW2 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Clrn2B2RVW2 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.37■□□□□ 0.69
Clrn2B2RVW2 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clrn2B2RVW2 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Clrn2B2RVW2 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clrn2B2RVW2 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Clrn2B2RVW2 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clrn2B2RVW2 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clrn2B2RVW2 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
Clrn2B2RVW2 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Clrn2B2RVW2 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Clrn2B2RVW2 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Clrn2B2RVW2 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clrn2B2RVW2 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Clrn2B2RVW2 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.37■□□□□ 0.69
Clrn2B2RVW2 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC19.37■□□□□ 0.69
Clrn2B2RVW2 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.37■□□□□ 0.69
Clrn2B2RVW2 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Clrn2B2RVW2 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC19.37■□□□□ 0.69
Clrn2B2RVW2 AC138767.1-201ENSMUST00000222661 415 ntBASIC19.37■□□□□ 0.69
Clrn2B2RVW2 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clrn2B2RVW2 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clrn2B2RVW2 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Clrn2B2RVW2 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clrn2B2RVW2 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Clrn2B2RVW2 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Clrn2B2RVW2 Tfap2a-209ENSMUST00000225180 1828 ntBASIC19.37■□□□□ 0.69
Clrn2B2RVW2 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clrn2B2RVW2 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clrn2B2RVW2 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clrn2B2RVW2 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Clrn2B2RVW2 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clrn2B2RVW2 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clrn2B2RVW2 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clrn2B2RVW2 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC19.36■□□□□ 0.69
Clrn2B2RVW2 Gm7862-201ENSMUST00000121461 292 ntBASIC19.36■□□□□ 0.69
Clrn2B2RVW2 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clrn2B2RVW2 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Clrn2B2RVW2 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clrn2B2RVW2 Mir5131-201ENSMUST00000175426 93 ntBASIC19.36■□□□□ 0.69
Clrn2B2RVW2 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC19.36■□□□□ 0.69
Clrn2B2RVW2 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clrn2B2RVW2 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clrn2B2RVW2 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.36■□□□□ 0.69
Clrn2B2RVW2 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.36■□□□□ 0.69
Clrn2B2RVW2 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clrn2B2RVW2 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clrn2B2RVW2 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms