Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Col4a6B1AVK5 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Col4a6B1AVK5 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Col4a6B1AVK5 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.24■□□□□ 0.35
Col4a6B1AVK5 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col4a6B1AVK5 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col4a6B1AVK5 AC131586.3-201ENSMUST00000228355 1367 ntBASIC17.24■□□□□ 0.35
Col4a6B1AVK5 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col4a6B1AVK5 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Col4a6B1AVK5 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a6B1AVK5 Gm27628-201ENSMUST00000184911 107 ntBASIC17.23■□□□□ 0.35
Col4a6B1AVK5 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.23■□□□□ 0.35
Col4a6B1AVK5 Gm43935-201ENSMUST00000203569 1050 ntBASIC17.23■□□□□ 0.35
Col4a6B1AVK5 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a6B1AVK5 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Col4a6B1AVK5 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.23■□□□□ 0.35
Col4a6B1AVK5 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
Col4a6B1AVK5 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a6B1AVK5 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a6B1AVK5 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a6B1AVK5 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a6B1AVK5 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.23■□□□□ 0.35
Col4a6B1AVK5 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.23■□□□□ 0.35
Col4a6B1AVK5 Gm12260-201ENSMUST00000122447 411 ntBASIC17.23■□□□□ 0.35
Col4a6B1AVK5 Gm25406-201ENSMUST00000157599 105 ntBASIC17.23■□□□□ 0.35
Col4a6B1AVK5 Gm2756-201ENSMUST00000195851 400 ntBASIC17.23■□□□□ 0.35
Col4a6B1AVK5 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Col4a6B1AVK5 AV026068-213ENSMUST00000223675 1171 ntBASIC17.23■□□□□ 0.35
Col4a6B1AVK5 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.23■□□□□ 0.35
Col4a6B1AVK5 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a6B1AVK5 Gm15590-201ENSMUST00000078419 552 ntBASIC17.23■□□□□ 0.35
Col4a6B1AVK5 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a6B1AVK5 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col4a6B1AVK5 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Col4a6B1AVK5 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col4a6B1AVK5 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Col4a6B1AVK5 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Col4a6B1AVK5 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col4a6B1AVK5 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Col4a6B1AVK5 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col4a6B1AVK5 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col4a6B1AVK5 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Col4a6B1AVK5 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a6B1AVK5 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a6B1AVK5 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Col4a6B1AVK5 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.21■□□□□ 0.35
Col4a6B1AVK5 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Col4a6B1AVK5 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a6B1AVK5 Gm43575-201ENSMUST00000196420 516 ntBASIC17.21■□□□□ 0.35
Col4a6B1AVK5 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a6B1AVK5 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a6B1AVK5 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a6B1AVK5 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a6B1AVK5 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a6B1AVK5 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a6B1AVK5 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Col4a6B1AVK5 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col4a6B1AVK5 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col4a6B1AVK5 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.2■□□□□ 0.34
Col4a6B1AVK5 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC17.2■□□□□ 0.34
Col4a6B1AVK5 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC17.2■□□□□ 0.34
Col4a6B1AVK5 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.2■□□□□ 0.34
Col4a6B1AVK5 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC17.2■□□□□ 0.34
Col4a6B1AVK5 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col4a6B1AVK5 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col4a6B1AVK5 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col4a6B1AVK5 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col4a6B1AVK5 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col4a6B1AVK5 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col4a6B1AVK5 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Col4a6B1AVK5 Gm23935-201ENSMUST00000102303 57 ntBASIC17.2■□□□□ 0.34
Col4a6B1AVK5 Gm24270-201ENSMUST00000102326 57 ntBASIC17.2■□□□□ 0.34
Col4a6B1AVK5 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC17.2■□□□□ 0.34
Col4a6B1AVK5 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col4a6B1AVK5 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC17.2■□□□□ 0.34
Col4a6B1AVK5 Gm24245-201ENSMUST00000157318 57 ntBASIC17.2■□□□□ 0.34
Col4a6B1AVK5 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col4a6B1AVK5 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col4a6B1AVK5 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col4a6B1AVK5 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col4a6B1AVK5 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col4a6B1AVK5 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col4a6B1AVK5 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col4a6B1AVK5 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.19■□□□□ 0.34
Col4a6B1AVK5 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col4a6B1AVK5 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col4a6B1AVK5 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.19■□□□□ 0.34
Col4a6B1AVK5 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC17.19■□□□□ 0.34
Col4a6B1AVK5 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col4a6B1AVK5 Gm9727-201ENSMUST00000161387 555 ntBASIC17.19■□□□□ 0.34
Col4a6B1AVK5 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC17.19■□□□□ 0.34
Col4a6B1AVK5 CT943659.1-201ENSMUST00000215459 326 ntBASIC17.19■□□□□ 0.34
Col4a6B1AVK5 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC17.19■□□□□ 0.34
Col4a6B1AVK5 AC154757.1-201ENSMUST00000228289 336 ntBASIC17.19■□□□□ 0.34
Col4a6B1AVK5 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.19■□□□□ 0.34
Col4a6B1AVK5 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col4a6B1AVK5 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col4a6B1AVK5 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.19■□□□□ 0.34
Col4a6B1AVK5 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col4a6B1AVK5 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms