Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm18421-201ENSMUST00000204122 625 ntBASIC14.1□□□□□ -0.15
Col6a4A2AX52 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a4A2AX52 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.1□□□□□ -0.15
Col6a4A2AX52 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a4A2AX52 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Col6a4A2AX52 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a4A2AX52 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a4A2AX52 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a4A2AX52 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a4A2AX52 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Col6a4A2AX52 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a4A2AX52 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a4A2AX52 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a4A2AX52 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a4A2AX52 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a4A2AX52 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.09□□□□□ -0.15
Col6a4A2AX52 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.09□□□□□ -0.15
Col6a4A2AX52 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a4A2AX52 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Col6a4A2AX52 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.09□□□□□ -0.15
Col6a4A2AX52 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.09□□□□□ -0.15
Col6a4A2AX52 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a4A2AX52 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a4A2AX52 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a4A2AX52 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a4A2AX52 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC14.09□□□□□ -0.15
Col6a4A2AX52 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a4A2AX52 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a4A2AX52 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a4A2AX52 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.09□□□□□ -0.15
Col6a4A2AX52 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Col6a4A2AX52 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a4A2AX52 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a4A2AX52 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.09□□□□□ -0.15
Col6a4A2AX52 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.09□□□□□ -0.15
Col6a4A2AX52 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a4A2AX52 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.09□□□□□ -0.15
Col6a4A2AX52 Gm6296-201ENSMUST00000222599 943 ntBASIC14.09□□□□□ -0.15
Col6a4A2AX52 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a4A2AX52 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a4A2AX52 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a4A2AX52 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a4A2AX52 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Col6a4A2AX52 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.08□□□□□ -0.15
Col6a4A2AX52 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Col6a4A2AX52 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a4A2AX52 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a4A2AX52 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a4A2AX52 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a4A2AX52 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a4A2AX52 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a4A2AX52 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a4A2AX52 Gm11779-201ENSMUST00000118541 368 ntBASIC14.08□□□□□ -0.16
Col6a4A2AX52 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Col6a4A2AX52 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC14.08□□□□□ -0.16
Col6a4A2AX52 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.08□□□□□ -0.16
Col6a4A2AX52 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.08□□□□□ -0.16
Col6a4A2AX52 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a4A2AX52 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a4A2AX52 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a4A2AX52 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a4A2AX52 Fam105a-203ENSMUST00000226170 3043 ntBASIC14.08□□□□□ -0.16
Col6a4A2AX52 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a4A2AX52 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a4A2AX52 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a4A2AX52 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.07□□□□□ -0.16
Col6a4A2AX52 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a4A2AX52 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a4A2AX52 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a4A2AX52 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a4A2AX52 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Col6a4A2AX52 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.07□□□□□ -0.16
Col6a4A2AX52 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a4A2AX52 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.07□□□□□ -0.16
Col6a4A2AX52 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.07□□□□□ -0.16
Col6a4A2AX52 Psmb5-202ENSMUST00000227257 622 ntBASIC14.07□□□□□ -0.16
Col6a4A2AX52 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.07□□□□□ -0.16
Col6a4A2AX52 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a4A2AX52 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a4A2AX52 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a4A2AX52 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a4A2AX52 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a4A2AX52 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a4A2AX52 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.07□□□□□ -0.16
Col6a4A2AX52 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a4A2AX52 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a4A2AX52 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a4A2AX52 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.07□□□□□ -0.16
Col6a4A2AX52 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a4A2AX52 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a4A2AX52 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a4A2AX52 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a4A2AX52 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a4A2AX52 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a4A2AX52 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a4A2AX52 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a4A2AX52 Gm23935-201ENSMUST00000102303 57 ntBASIC14.06□□□□□ -0.16
Col6a4A2AX52 Gm24270-201ENSMUST00000102326 57 ntBASIC14.06□□□□□ -0.16
Col6a4A2AX52 Gm24245-201ENSMUST00000157318 57 ntBASIC14.06□□□□□ -0.16
Col6a4A2AX52 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms