Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Shroom2A2ALU4 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Shroom2A2ALU4 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC26.44■■□□□ 1.82
Shroom2A2ALU4 Gm8349-201ENSMUST00000182720 1003 ntBASIC26.44■■□□□ 1.82
Shroom2A2ALU4 AC155252.2-201ENSMUST00000226946 680 ntBASIC26.44■■□□□ 1.82
Shroom2A2ALU4 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Shroom2A2ALU4 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Shroom2A2ALU4 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Shroom2A2ALU4 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Shroom2A2ALU4 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC26.43■■□□□ 1.82
Shroom2A2ALU4 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC26.43■■□□□ 1.82
Shroom2A2ALU4 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC26.43■■□□□ 1.82
Shroom2A2ALU4 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Shroom2A2ALU4 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
Shroom2A2ALU4 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Shroom2A2ALU4 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC26.43■■□□□ 1.82
Shroom2A2ALU4 Gm13332-201ENSMUST00000120451 1398 ntBASIC26.43■■□□□ 1.82
Shroom2A2ALU4 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC26.43■■□□□ 1.82
Shroom2A2ALU4 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
Shroom2A2ALU4 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Shroom2A2ALU4 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Shroom2A2ALU4 Zfp264-201ENSMUST00000208656 1563 ntBASIC26.42■■□□□ 1.82
Shroom2A2ALU4 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Shroom2A2ALU4 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Shroom2A2ALU4 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Shroom2A2ALU4 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Shroom2A2ALU4 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
Shroom2A2ALU4 Fgf17-202ENSMUST00000227123 1336 ntBASIC26.42■■□□□ 1.82
Shroom2A2ALU4 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Shroom2A2ALU4 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Shroom2A2ALU4 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Shroom2A2ALU4 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC26.42■■□□□ 1.82
Shroom2A2ALU4 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Shroom2A2ALU4 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
Shroom2A2ALU4 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Shroom2A2ALU4 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
Shroom2A2ALU4 Gm45141-201ENSMUST00000206502 1888 ntBASIC26.42■■□□□ 1.82
Shroom2A2ALU4 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
Shroom2A2ALU4 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Shroom2A2ALU4 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Shroom2A2ALU4 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Shroom2A2ALU4 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Shroom2A2ALU4 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Shroom2A2ALU4 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC26.41■■□□□ 1.82
Shroom2A2ALU4 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC26.41■■□□□ 1.82
Shroom2A2ALU4 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Shroom2A2ALU4 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Shroom2A2ALU4 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Shroom2A2ALU4 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Shroom2A2ALU4 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Shroom2A2ALU4 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Shroom2A2ALU4 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Shroom2A2ALU4 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Shroom2A2ALU4 Gm7507-201ENSMUST00000183053 1008 ntBASIC26.4■■□□□ 1.82
Shroom2A2ALU4 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
Shroom2A2ALU4 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Shroom2A2ALU4 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Shroom2A2ALU4 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Shroom2A2ALU4 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Shroom2A2ALU4 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Shroom2A2ALU4 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Shroom2A2ALU4 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Shroom2A2ALU4 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Shroom2A2ALU4 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Shroom2A2ALU4 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Shroom2A2ALU4 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
Shroom2A2ALU4 Gm17968-201ENSMUST00000194902 784 ntBASIC26.39■■□□□ 1.82
Shroom2A2ALU4 Gm44492-201ENSMUST00000197012 141 ntBASIC26.39■■□□□ 1.82
Shroom2A2ALU4 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Shroom2A2ALU4 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
Shroom2A2ALU4 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC26.39■■□□□ 1.81
Shroom2A2ALU4 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
Shroom2A2ALU4 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
Shroom2A2ALU4 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Shroom2A2ALU4 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Shroom2A2ALU4 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Shroom2A2ALU4 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Shroom2A2ALU4 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Shroom2A2ALU4 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Shroom2A2ALU4 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC26.38■■□□□ 1.81
Shroom2A2ALU4 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Shroom2A2ALU4 Gm27300-201ENSMUST00000184085 97 ntBASIC26.38■■□□□ 1.81
Shroom2A2ALU4 Gm27335-201ENSMUST00000184758 97 ntBASIC26.38■■□□□ 1.81
Shroom2A2ALU4 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Shroom2A2ALU4 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC26.38■■□□□ 1.81
Shroom2A2ALU4 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Shroom2A2ALU4 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Shroom2A2ALU4 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Shroom2A2ALU4 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Shroom2A2ALU4 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
Shroom2A2ALU4 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC26.37■■□□□ 1.81
Shroom2A2ALU4 Gm8655-201ENSMUST00000221159 852 ntBASIC26.37■■□□□ 1.81
Shroom2A2ALU4 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Shroom2A2ALU4 AC159106.1-201ENSMUST00000224421 690 ntBASIC26.37■■□□□ 1.81
Shroom2A2ALU4 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Shroom2A2ALU4 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
Shroom2A2ALU4 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC26.37■■□□□ 1.81
Shroom2A2ALU4 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Shroom2A2ALU4 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Shroom2A2ALU4 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC26.37■■□□□ 1.81
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms