Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Gm28729A0A1B0GSW2 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Gm28729A0A1B0GSW2 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Gm28729A0A1B0GSW2 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Gm28729A0A1B0GSW2 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Gm28729A0A1B0GSW2 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm28729A0A1B0GSW2 Gm13312-201ENSMUST00000119631 718 ntBASIC16.33■□□□□ 0.2
Gm28729A0A1B0GSW2 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.33■□□□□ 0.2
Gm28729A0A1B0GSW2 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Gm28729A0A1B0GSW2 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Gm28729A0A1B0GSW2 Gm27867-201ENSMUST00000184778 125 ntBASIC16.33■□□□□ 0.2
Gm28729A0A1B0GSW2 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.33■□□□□ 0.2
Gm28729A0A1B0GSW2 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
Gm28729A0A1B0GSW2 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm28729A0A1B0GSW2 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm28729A0A1B0GSW2 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Gm28729A0A1B0GSW2 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm28729A0A1B0GSW2 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm28729A0A1B0GSW2 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm28729A0A1B0GSW2 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm28729A0A1B0GSW2 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm28729A0A1B0GSW2 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Gm28729A0A1B0GSW2 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm28729A0A1B0GSW2 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Gm28729A0A1B0GSW2 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm28729A0A1B0GSW2 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm28729A0A1B0GSW2 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Gm28729A0A1B0GSW2 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Gm28729A0A1B0GSW2 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Gm28729A0A1B0GSW2 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm28729A0A1B0GSW2 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Gm28729A0A1B0GSW2 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.32■□□□□ 0.2
Gm28729A0A1B0GSW2 Gm10052-201ENSMUST00000168019 960 ntBASIC16.32■□□□□ 0.2
Gm28729A0A1B0GSW2 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Gm28729A0A1B0GSW2 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Gm28729A0A1B0GSW2 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Gm28729A0A1B0GSW2 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.32■□□□□ 0.2
Gm28729A0A1B0GSW2 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm28729A0A1B0GSW2 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Gm28729A0A1B0GSW2 Gm7729-201ENSMUST00000050143 801 ntBASIC16.32■□□□□ 0.2
Gm28729A0A1B0GSW2 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm28729A0A1B0GSW2 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm28729A0A1B0GSW2 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm28729A0A1B0GSW2 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Gm28729A0A1B0GSW2 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm28729A0A1B0GSW2 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm28729A0A1B0GSW2 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm28729A0A1B0GSW2 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm28729A0A1B0GSW2 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gm28729A0A1B0GSW2 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gm28729A0A1B0GSW2 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.31■□□□□ 0.2
Gm28729A0A1B0GSW2 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Gm28729A0A1B0GSW2 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm28729A0A1B0GSW2 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.31■□□□□ 0.2
Gm28729A0A1B0GSW2 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm28729A0A1B0GSW2 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm28729A0A1B0GSW2 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm28729A0A1B0GSW2 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Gm28729A0A1B0GSW2 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.31■□□□□ 0.2
Gm28729A0A1B0GSW2 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.31■□□□□ 0.2
Gm28729A0A1B0GSW2 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.31■□□□□ 0.2
Gm28729A0A1B0GSW2 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Gm28729A0A1B0GSW2 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
Gm28729A0A1B0GSW2 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
Gm28729A0A1B0GSW2 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.31■□□□□ 0.2
Gm28729A0A1B0GSW2 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.31■□□□□ 0.2
Gm28729A0A1B0GSW2 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm28729A0A1B0GSW2 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm28729A0A1B0GSW2 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm28729A0A1B0GSW2 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.31■□□□□ 0.2
Gm28729A0A1B0GSW2 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm28729A0A1B0GSW2 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm28729A0A1B0GSW2 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Gm28729A0A1B0GSW2 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.3■□□□□ 0.2
Gm28729A0A1B0GSW2 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28729A0A1B0GSW2 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28729A0A1B0GSW2 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Gm28729A0A1B0GSW2 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28729A0A1B0GSW2 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28729A0A1B0GSW2 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28729A0A1B0GSW2 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28729A0A1B0GSW2 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28729A0A1B0GSW2 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28729A0A1B0GSW2 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.3■□□□□ 0.2
Gm28729A0A1B0GSW2 AW822252-206ENSMUST00000208904 237 ntBASIC16.3■□□□□ 0.2
Gm28729A0A1B0GSW2 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.3■□□□□ 0.2
Gm28729A0A1B0GSW2 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.3■□□□□ 0.2
Gm28729A0A1B0GSW2 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28729A0A1B0GSW2 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28729A0A1B0GSW2 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28729A0A1B0GSW2 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.3■□□□□ 0.2
Gm28729A0A1B0GSW2 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Gm28729A0A1B0GSW2 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28729A0A1B0GSW2 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28729A0A1B0GSW2 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28729A0A1B0GSW2 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.29■□□□□ 0.2
Gm28729A0A1B0GSW2 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28729A0A1B0GSW2 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28729A0A1B0GSW2 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28729A0A1B0GSW2 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms