Protein–RNA interactions for Protein: A0A140T8T4

Rpl9-ps6, Ribosomal protein L9, pseudogene 6, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl9-ps6A0A140T8T4 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Gm14859-201ENSMUST00000117752 357 ntBASIC17.21■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.21■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Gm18421-201ENSMUST00000204122 625 ntBASIC17.21■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Gm45328-201ENSMUST00000210942 917 ntBASIC17.21■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.21■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.2■□□□□ 0.34
Rpl9-ps6A0A140T8T4 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.2■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Gm27704-201ENSMUST00000185094 107 ntBASIC17.2■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Rpl9-ps6A0A140T8T4 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rpl9-ps6A0A140T8T4 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.2■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.19■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.19■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.18■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.18■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.18■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Gm7284-201ENSMUST00000131667 944 ntBASIC17.18■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.18■□□□□ 0.34
Rpl9-ps6A0A140T8T4 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.18■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.18■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpl9-ps6A0A140T8T4 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.17■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.17■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.17■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpl9-ps6A0A140T8T4 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.17■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rpl9-ps6A0A140T8T4 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.17■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpl9-ps6A0A140T8T4 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.16■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpl9-ps6A0A140T8T4 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms