Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv17A0A140T8P8 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv17A0A140T8P8 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv17A0A140T8P8 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv17A0A140T8P8 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv17A0A140T8P8 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv17A0A140T8P8 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv17A0A140T8P8 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv17A0A140T8P8 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv17A0A140T8P8 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trbv17A0A140T8P8 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv17A0A140T8P8 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Trbv17A0A140T8P8 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC12.87□□□□□ -0.35
Trbv17A0A140T8P8 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv17A0A140T8P8 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC12.87□□□□□ -0.35
Trbv17A0A140T8P8 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC12.87□□□□□ -0.35
Trbv17A0A140T8P8 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv17A0A140T8P8 Gm38027-201ENSMUST00000192315 235 ntBASIC12.87□□□□□ -0.35
Trbv17A0A140T8P8 Gm37025-201ENSMUST00000195159 829 ntBASIC12.87□□□□□ -0.35
Trbv17A0A140T8P8 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC12.87□□□□□ -0.35
Trbv17A0A140T8P8 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv17A0A140T8P8 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv17A0A140T8P8 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv17A0A140T8P8 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv17A0A140T8P8 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv17A0A140T8P8 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv17A0A140T8P8 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv17A0A140T8P8 Gm5417-201ENSMUST00000079706 384 ntBASIC12.87□□□□□ -0.35
Trbv17A0A140T8P8 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv17A0A140T8P8 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv17A0A140T8P8 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC12.87□□□□□ -0.35
Trbv17A0A140T8P8 AC154231.1-201ENSMUST00000220564 2175 ntBASIC12.87□□□□□ -0.35
Trbv17A0A140T8P8 Gm5898-201ENSMUST00000121016 2071 ntBASIC12.87□□□□□ -0.35
Trbv17A0A140T8P8 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv17A0A140T8P8 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv17A0A140T8P8 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv17A0A140T8P8 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC12.87□□□□□ -0.35
Trbv17A0A140T8P8 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv17A0A140T8P8 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv17A0A140T8P8 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv17A0A140T8P8 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv17A0A140T8P8 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Trbv17A0A140T8P8 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv17A0A140T8P8 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv17A0A140T8P8 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv17A0A140T8P8 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv17A0A140T8P8 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv17A0A140T8P8 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv17A0A140T8P8 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv17A0A140T8P8 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv17A0A140T8P8 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC12.86□□□□□ -0.35
Trbv17A0A140T8P8 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv17A0A140T8P8 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv17A0A140T8P8 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv17A0A140T8P8 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv17A0A140T8P8 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC12.86□□□□□ -0.35
Trbv17A0A140T8P8 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv17A0A140T8P8 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC12.86□□□□□ -0.35
Trbv17A0A140T8P8 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv17A0A140T8P8 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv17A0A140T8P8 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv17A0A140T8P8 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv17A0A140T8P8 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv17A0A140T8P8 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv17A0A140T8P8 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC12.86□□□□□ -0.35
Trbv17A0A140T8P8 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv17A0A140T8P8 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv17A0A140T8P8 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv17A0A140T8P8 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv17A0A140T8P8 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv17A0A140T8P8 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv17A0A140T8P8 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv17A0A140T8P8 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv17A0A140T8P8 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv17A0A140T8P8 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv17A0A140T8P8 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trbv17A0A140T8P8 Gm7638-201ENSMUST00000121348 967 ntBASIC12.85□□□□□ -0.35
Trbv17A0A140T8P8 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC12.85□□□□□ -0.35
Trbv17A0A140T8P8 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC12.85□□□□□ -0.35
Trbv17A0A140T8P8 Mir5122-201ENSMUST00000175004 89 ntBASIC12.85□□□□□ -0.35
Trbv17A0A140T8P8 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC12.85□□□□□ -0.35
Trbv17A0A140T8P8 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv17A0A140T8P8 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv17A0A140T8P8 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv17A0A140T8P8 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv17A0A140T8P8 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv17A0A140T8P8 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv17A0A140T8P8 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Trbv17A0A140T8P8 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv17A0A140T8P8 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Trbv17A0A140T8P8 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv17A0A140T8P8 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv17A0A140T8P8 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv17A0A140T8P8 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv17A0A140T8P8 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv17A0A140T8P8 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv17A0A140T8P8 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC12.85□□□□□ -0.35
Trbv17A0A140T8P8 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv17A0A140T8P8 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv17A0A140T8P8 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms