Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9d-4A0A0G2JG37 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9d-4A0A0G2JG37 Gm37820-201ENSMUST00000194021 2147 ntBASIC11.54□□□□□ -0.56
Trav9d-4A0A0G2JG37 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9d-4A0A0G2JG37 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9d-4A0A0G2JG37 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9d-4A0A0G2JG37 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9d-4A0A0G2JG37 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trav9d-4A0A0G2JG37 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9d-4A0A0G2JG37 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9d-4A0A0G2JG37 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9d-4A0A0G2JG37 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9d-4A0A0G2JG37 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9d-4A0A0G2JG37 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9d-4A0A0G2JG37 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9d-4A0A0G2JG37 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9d-4A0A0G2JG37 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9d-4A0A0G2JG37 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9d-4A0A0G2JG37 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC11.53□□□□□ -0.56
Trav9d-4A0A0G2JG37 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9d-4A0A0G2JG37 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav9d-4A0A0G2JG37 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC11.53□□□□□ -0.56
Trav9d-4A0A0G2JG37 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9d-4A0A0G2JG37 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trav9d-4A0A0G2JG37 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC11.53□□□□□ -0.56
Trav9d-4A0A0G2JG37 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9d-4A0A0G2JG37 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9d-4A0A0G2JG37 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9d-4A0A0G2JG37 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9d-4A0A0G2JG37 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9d-4A0A0G2JG37 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9d-4A0A0G2JG37 Gm43272-201ENSMUST00000200599 1584 ntBASIC11.53□□□□□ -0.56
Trav9d-4A0A0G2JG37 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9d-4A0A0G2JG37 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9d-4A0A0G2JG37 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9d-4A0A0G2JG37 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9d-4A0A0G2JG37 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC11.53□□□□□ -0.56
Trav9d-4A0A0G2JG37 Gm8839-201ENSMUST00000121279 1645 ntBASIC11.53□□□□□ -0.56
Trav9d-4A0A0G2JG37 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9d-4A0A0G2JG37 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav9d-4A0A0G2JG37 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav9d-4A0A0G2JG37 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav9d-4A0A0G2JG37 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trav9d-4A0A0G2JG37 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav9d-4A0A0G2JG37 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.56
Trav9d-4A0A0G2JG37 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC11.52□□□□□ -0.56
Trav9d-4A0A0G2JG37 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav9d-4A0A0G2JG37 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9d-4A0A0G2JG37 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9d-4A0A0G2JG37 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9d-4A0A0G2JG37 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9d-4A0A0G2JG37 Gm11620-201ENSMUST00000118770 1845 ntBASIC11.52□□□□□ -0.57
Trav9d-4A0A0G2JG37 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9d-4A0A0G2JG37 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC11.52□□□□□ -0.57
Trav9d-4A0A0G2JG37 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC11.52□□□□□ -0.57
Trav9d-4A0A0G2JG37 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC11.52□□□□□ -0.57
Trav9d-4A0A0G2JG37 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC11.52□□□□□ -0.57
Trav9d-4A0A0G2JG37 Gm18671-201ENSMUST00000214826 683 ntBASIC11.52□□□□□ -0.57
Trav9d-4A0A0G2JG37 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Trav9d-4A0A0G2JG37 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9d-4A0A0G2JG37 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9d-4A0A0G2JG37 CT010478.1-201ENSMUST00000220747 2787 ntBASIC11.52□□□□□ -0.57
Trav9d-4A0A0G2JG37 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9d-4A0A0G2JG37 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9d-4A0A0G2JG37 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trav9d-4A0A0G2JG37 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9d-4A0A0G2JG37 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9d-4A0A0G2JG37 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9d-4A0A0G2JG37 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9d-4A0A0G2JG37 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9d-4A0A0G2JG37 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9d-4A0A0G2JG37 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9d-4A0A0G2JG37 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9d-4A0A0G2JG37 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9d-4A0A0G2JG37 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav9d-4A0A0G2JG37 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9d-4A0A0G2JG37 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC11.51□□□□□ -0.57
Trav9d-4A0A0G2JG37 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9d-4A0A0G2JG37 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9d-4A0A0G2JG37 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9d-4A0A0G2JG37 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Trav9d-4A0A0G2JG37 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trav9d-4A0A0G2JG37 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav9d-4A0A0G2JG37 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9d-4A0A0G2JG37 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trav9d-4A0A0G2JG37 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9d-4A0A0G2JG37 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9d-4A0A0G2JG37 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9d-4A0A0G2JG37 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9d-4A0A0G2JG37 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9d-4A0A0G2JG37 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9d-4A0A0G2JG37 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
Trav9d-4A0A0G2JG37 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9d-4A0A0G2JG37 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9d-4A0A0G2JG37 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9d-4A0A0G2JG37 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9d-4A0A0G2JG37 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav9d-4A0A0G2JG37 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9d-4A0A0G2JG37 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9d-4A0A0G2JG37 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms