Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13n-1A0A0G2JEU8 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Gm10013-201ENSMUST00000106074 672 ntBASIC12.17□□□□□ -0.46
Trav13n-1A0A0G2JEU8 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC12.16□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Gm16061-201ENSMUST00000122167 857 ntBASIC12.16□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Gm8969-201ENSMUST00000199694 526 ntBASIC12.16□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Gm18101-201ENSMUST00000215769 548 ntBASIC12.16□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav13n-1A0A0G2JEU8 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13n-1A0A0G2JEU8 AC134329.2-201ENSMUST00000217897 428 ntBASIC12.15□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13n-1A0A0G2JEU8 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC12.14□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC12.14□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Gm13474-201ENSMUST00000122466 815 ntBASIC12.14□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC12.14□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Gm4217-201ENSMUST00000182243 1002 ntBASIC12.14□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC12.14□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC12.14□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms