Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3n-3A0A0G2JEM0 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC12.73□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Gm6420-201ENSMUST00000193885 723 ntBASIC12.73□□□□□ -0.37
Trav3n-3A0A0G2JEM0 AC099934.2-201ENSMUST00000196389 70 ntBASIC12.73□□□□□ -0.37
Trav3n-3A0A0G2JEM0 AC156953.1-201ENSMUST00000196953 70 ntBASIC12.73□□□□□ -0.37
Trav3n-3A0A0G2JEM0 AC157822.2-201ENSMUST00000200291 70 ntBASIC12.73□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3n-3A0A0G2JEM0 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Gm8839-201ENSMUST00000121279 1645 ntBASIC12.73□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Gm37563-201ENSMUST00000192580 1513 ntBASIC12.72□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Gm16499-203ENSMUST00000204633 2177 ntBASIC12.72□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav3n-3A0A0G2JEM0 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC12.72□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3n-3A0A0G2JEM0 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC12.72□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC12.71□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Gm10418-201ENSMUST00000100943 576 ntBASIC12.71□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC12.71□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC12.71□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Gm7514-201ENSMUST00000209475 934 ntBASIC12.71□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC12.71□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav3n-3A0A0G2JEM0 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav3n-3A0A0G2JEM0 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav3n-3A0A0G2JEM0 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.71□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms