Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Igkv5-43A0A0B4J1J2 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.07■□□□□ 0.32
Igkv5-43A0A0B4J1J2 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.07■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.06■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.06■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Igkv5-43A0A0B4J1J2 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.05■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Igkv5-43A0A0B4J1J2 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.05■□□□□ 0.32
Igkv5-43A0A0B4J1J2 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.05■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Gm44430-201ENSMUST00000203376 995 ntBASIC17.05■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.05■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.04■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Gm10052-201ENSMUST00000168019 960 ntBASIC17.04■□□□□ 0.32
Igkv5-43A0A0B4J1J2 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.04■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.04■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.04■□□□□ 0.32
Igkv5-43A0A0B4J1J2 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.04■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Gm7729-201ENSMUST00000050143 801 ntBASIC17.04■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.04■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.03■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.03■□□□□ 0.32
Igkv5-43A0A0B4J1J2 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.03■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms