Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.94■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC15.93■□□□□ 0.14
Sirpb1aA0A0A6YYP6 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC15.93■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Alkbh1-212ENSMUST00000185301 408 ntBASIC15.93■□□□□ 0.14
Sirpb1aA0A0A6YYP6 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.93■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.93■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sirpb1aA0A0A6YYP6 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.92■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sirpb1aA0A0A6YYP6 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC15.92■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Sirpb1aA0A0A6YYP6 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sirpb1aA0A0A6YYP6 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.92■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.92■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC15.91■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Gm4974-201ENSMUST00000209974 875 ntBASIC15.91■□□□□ 0.14
Sirpb1aA0A0A6YYP6 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sirpb1aA0A0A6YYP6 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Dio3-201ENSMUST00000097228 1449 ntBASIC15.91■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.91■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.91■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.91■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.91■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sirpb1aA0A0A6YYP6 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.9■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sirpb1aA0A0A6YYP6 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms