Protein–RNA interactions for Protein: A0A0A6YWQ1

Trbv23, T cell receptor beta, variable V23 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv23A0A0A6YWQ1 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Trbv23A0A0A6YWQ1 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trbv23A0A0A6YWQ1 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv23A0A0A6YWQ1 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv23A0A0A6YWQ1 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv23A0A0A6YWQ1 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trbv23A0A0A6YWQ1 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trbv23A0A0A6YWQ1 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv23A0A0A6YWQ1 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv23A0A0A6YWQ1 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.45□□□□□ -0.1
Trbv23A0A0A6YWQ1 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv23A0A0A6YWQ1 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv23A0A0A6YWQ1 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv23A0A0A6YWQ1 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC14.45□□□□□ -0.1
Trbv23A0A0A6YWQ1 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC14.45□□□□□ -0.1
Trbv23A0A0A6YWQ1 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC14.45□□□□□ -0.1
Trbv23A0A0A6YWQ1 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.45□□□□□ -0.1
Trbv23A0A0A6YWQ1 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.45□□□□□ -0.1
Trbv23A0A0A6YWQ1 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC14.45□□□□□ -0.1
Trbv23A0A0A6YWQ1 Wnt10b-205ENSMUST00000226846 1204 ntBASIC14.45□□□□□ -0.1
Trbv23A0A0A6YWQ1 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv23A0A0A6YWQ1 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv23A0A0A6YWQ1 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv23A0A0A6YWQ1 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC14.45□□□□□ -0.1
Trbv23A0A0A6YWQ1 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv23A0A0A6YWQ1 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv23A0A0A6YWQ1 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv23A0A0A6YWQ1 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv23A0A0A6YWQ1 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.45□□□□□ -0.1
Trbv23A0A0A6YWQ1 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv23A0A0A6YWQ1 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv23A0A0A6YWQ1 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv23A0A0A6YWQ1 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv23A0A0A6YWQ1 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.45□□□□□ -0.1
Trbv23A0A0A6YWQ1 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv23A0A0A6YWQ1 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv23A0A0A6YWQ1 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.44□□□□□ -0.1
Trbv23A0A0A6YWQ1 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv23A0A0A6YWQ1 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC14.44□□□□□ -0.1
Trbv23A0A0A6YWQ1 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.44□□□□□ -0.1
Trbv23A0A0A6YWQ1 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trbv23A0A0A6YWQ1 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv23A0A0A6YWQ1 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv23A0A0A6YWQ1 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv23A0A0A6YWQ1 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv23A0A0A6YWQ1 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv23A0A0A6YWQ1 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv23A0A0A6YWQ1 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.44□□□□□ -0.1
Trbv23A0A0A6YWQ1 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv23A0A0A6YWQ1 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv23A0A0A6YWQ1 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv23A0A0A6YWQ1 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.44□□□□□ -0.1
Trbv23A0A0A6YWQ1 Gm11927-201ENSMUST00000118472 759 ntBASIC14.44□□□□□ -0.1
Trbv23A0A0A6YWQ1 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Trbv23A0A0A6YWQ1 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv23A0A0A6YWQ1 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Trbv23A0A0A6YWQ1 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.44□□□□□ -0.1
Trbv23A0A0A6YWQ1 Gm38285-201ENSMUST00000192928 922 ntBASIC14.44□□□□□ -0.1
Trbv23A0A0A6YWQ1 Gm20049-201ENSMUST00000219950 730 ntBASIC14.44□□□□□ -0.1
Trbv23A0A0A6YWQ1 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv23A0A0A6YWQ1 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Trbv23A0A0A6YWQ1 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv23A0A0A6YWQ1 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv23A0A0A6YWQ1 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv23A0A0A6YWQ1 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC14.44□□□□□ -0.1
Trbv23A0A0A6YWQ1 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv23A0A0A6YWQ1 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv23A0A0A6YWQ1 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv23A0A0A6YWQ1 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv23A0A0A6YWQ1 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trbv23A0A0A6YWQ1 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv23A0A0A6YWQ1 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.43□□□□□ -0.1
Trbv23A0A0A6YWQ1 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv23A0A0A6YWQ1 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv23A0A0A6YWQ1 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv23A0A0A6YWQ1 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv23A0A0A6YWQ1 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv23A0A0A6YWQ1 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv23A0A0A6YWQ1 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv23A0A0A6YWQ1 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv23A0A0A6YWQ1 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv23A0A0A6YWQ1 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv23A0A0A6YWQ1 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv23A0A0A6YWQ1 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv23A0A0A6YWQ1 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv23A0A0A6YWQ1 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trbv23A0A0A6YWQ1 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.43□□□□□ -0.1
Trbv23A0A0A6YWQ1 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv23A0A0A6YWQ1 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.43□□□□□ -0.1
Trbv23A0A0A6YWQ1 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trbv23A0A0A6YWQ1 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv23A0A0A6YWQ1 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trbv23A0A0A6YWQ1 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv23A0A0A6YWQ1 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv23A0A0A6YWQ1 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv23A0A0A6YWQ1 Dio3-201ENSMUST00000097228 1449 ntBASIC14.42□□□□□ -0.1
Trbv23A0A0A6YWQ1 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trbv23A0A0A6YWQ1 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv23A0A0A6YWQ1 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv23A0A0A6YWQ1 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms