Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-7A0A075B6B0 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-7A0A075B6B0 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Trav6d-7A0A075B6B0 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-7A0A075B6B0 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-7A0A075B6B0 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-7A0A075B6B0 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-7A0A075B6B0 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-7A0A075B6B0 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-7A0A075B6B0 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-7A0A075B6B0 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Trav6d-7A0A075B6B0 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trav6d-7A0A075B6B0 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC12.97□□□□□ -0.33
Trav6d-7A0A075B6B0 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC12.97□□□□□ -0.33
Trav6d-7A0A075B6B0 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-7A0A075B6B0 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Trav6d-7A0A075B6B0 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trav6d-7A0A075B6B0 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-7A0A075B6B0 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-7A0A075B6B0 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-7A0A075B6B0 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Trav6d-7A0A075B6B0 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-7A0A075B6B0 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-7A0A075B6B0 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-7A0A075B6B0 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Trav6d-7A0A075B6B0 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav6d-7A0A075B6B0 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC12.97□□□□□ -0.33
Trav6d-7A0A075B6B0 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-7A0A075B6B0 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6d-7A0A075B6B0 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trav6d-7A0A075B6B0 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6d-7A0A075B6B0 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC12.96□□□□□ -0.33
Trav6d-7A0A075B6B0 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6d-7A0A075B6B0 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6d-7A0A075B6B0 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Trav6d-7A0A075B6B0 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6d-7A0A075B6B0 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6d-7A0A075B6B0 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC12.96□□□□□ -0.33
Trav6d-7A0A075B6B0 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6d-7A0A075B6B0 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6d-7A0A075B6B0 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6d-7A0A075B6B0 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6d-7A0A075B6B0 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6d-7A0A075B6B0 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trav6d-7A0A075B6B0 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6d-7A0A075B6B0 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC12.96□□□□□ -0.33
Trav6d-7A0A075B6B0 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC12.96□□□□□ -0.33
Trav6d-7A0A075B6B0 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6d-7A0A075B6B0 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6d-7A0A075B6B0 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6d-7A0A075B6B0 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6d-7A0A075B6B0 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6d-7A0A075B6B0 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Trav6d-7A0A075B6B0 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6d-7A0A075B6B0 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6d-7A0A075B6B0 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Trav6d-7A0A075B6B0 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6d-7A0A075B6B0 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6d-7A0A075B6B0 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6d-7A0A075B6B0 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6d-7A0A075B6B0 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6d-7A0A075B6B0 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6d-7A0A075B6B0 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6d-7A0A075B6B0 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Trav6d-7A0A075B6B0 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6d-7A0A075B6B0 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC12.95□□□□□ -0.34
Trav6d-7A0A075B6B0 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trav6d-7A0A075B6B0 AC158538.1-201ENSMUST00000225870 294 ntBASIC12.95□□□□□ -0.34
Trav6d-7A0A075B6B0 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6d-7A0A075B6B0 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6d-7A0A075B6B0 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6d-7A0A075B6B0 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6d-7A0A075B6B0 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6d-7A0A075B6B0 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6d-7A0A075B6B0 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6d-7A0A075B6B0 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav6d-7A0A075B6B0 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trav6d-7A0A075B6B0 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trav6d-7A0A075B6B0 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6d-7A0A075B6B0 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6d-7A0A075B6B0 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6d-7A0A075B6B0 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6d-7A0A075B6B0 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6d-7A0A075B6B0 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6d-7A0A075B6B0 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav6d-7A0A075B6B0 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6d-7A0A075B6B0 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6d-7A0A075B6B0 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trav6d-7A0A075B6B0 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6d-7A0A075B6B0 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav6d-7A0A075B6B0 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6d-7A0A075B6B0 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav6d-7A0A075B6B0 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6d-7A0A075B6B0 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6d-7A0A075B6B0 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav6d-7A0A075B6B0 Gm13836-201ENSMUST00000121159 501 ntBASIC12.94□□□□□ -0.34
Trav6d-7A0A075B6B0 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6d-7A0A075B6B0 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC12.94□□□□□ -0.34
Trav6d-7A0A075B6B0 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav6d-7A0A075B6B0 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms