Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav18A0A075B656 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav18A0A075B656 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav18A0A075B656 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav18A0A075B656 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Trav18A0A075B656 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Trav18A0A075B656 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav18A0A075B656 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav18A0A075B656 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav18A0A075B656 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Trav18A0A075B656 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.76□□□□□ -0.21
Trav18A0A075B656 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC13.76□□□□□ -0.21
Trav18A0A075B656 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Trav18A0A075B656 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav18A0A075B656 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav18A0A075B656 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trav18A0A075B656 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav18A0A075B656 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav18A0A075B656 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav18A0A075B656 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Trav18A0A075B656 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav18A0A075B656 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav18A0A075B656 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav18A0A075B656 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav18A0A075B656 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav18A0A075B656 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav18A0A075B656 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav18A0A075B656 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav18A0A075B656 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav18A0A075B656 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav18A0A075B656 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav18A0A075B656 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav18A0A075B656 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav18A0A075B656 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav18A0A075B656 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
Trav18A0A075B656 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trav18A0A075B656 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav18A0A075B656 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav18A0A075B656 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav18A0A075B656 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav18A0A075B656 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav18A0A075B656 Gm5643-201ENSMUST00000117081 966 ntBASIC13.75□□□□□ -0.21
Trav18A0A075B656 Gm10698-201ENSMUST00000182663 604 ntBASIC13.75□□□□□ -0.21
Trav18A0A075B656 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav18A0A075B656 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trav18A0A075B656 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav18A0A075B656 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav18A0A075B656 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav18A0A075B656 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav18A0A075B656 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav18A0A075B656 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav18A0A075B656 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav18A0A075B656 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav18A0A075B656 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav18A0A075B656 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trav18A0A075B656 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav18A0A075B656 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav18A0A075B656 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav18A0A075B656 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav18A0A075B656 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
Trav18A0A075B656 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav18A0A075B656 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trav18A0A075B656 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav18A0A075B656 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav18A0A075B656 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav18A0A075B656 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav18A0A075B656 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav18A0A075B656 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav18A0A075B656 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav18A0A075B656 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Trav18A0A075B656 Gm15378-201ENSMUST00000121894 207 ntBASIC13.74□□□□□ -0.21
Trav18A0A075B656 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav18A0A075B656 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav18A0A075B656 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trav18A0A075B656 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav18A0A075B656 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav18A0A075B656 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav18A0A075B656 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav18A0A075B656 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav18A0A075B656 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav18A0A075B656 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav18A0A075B656 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav18A0A075B656 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav18A0A075B656 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trav18A0A075B656 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav18A0A075B656 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trav18A0A075B656 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav18A0A075B656 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav18A0A075B656 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav18A0A075B656 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav18A0A075B656 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav18A0A075B656 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav18A0A075B656 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav18A0A075B656 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav18A0A075B656 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav18A0A075B656 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.73□□□□□ -0.21
Trav18A0A075B656 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trav18A0A075B656 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav18A0A075B656 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav18A0A075B656 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms