Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav4-4-dv10A0A075B651 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav4-4-dv10A0A075B651 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav4-4-dv10A0A075B651 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav4-4-dv10A0A075B651 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav4-4-dv10A0A075B651 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav4-4-dv10A0A075B651 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav4-4-dv10A0A075B651 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav4-4-dv10A0A075B651 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Trav4-4-dv10A0A075B651 Gm12896-201ENSMUST00000118430 226 ntBASIC13.09□□□□□ -0.31
Trav4-4-dv10A0A075B651 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav4-4-dv10A0A075B651 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav4-4-dv10A0A075B651 Gm27405-201ENSMUST00000184201 112 ntBASIC13.09□□□□□ -0.31
Trav4-4-dv10A0A075B651 Gm3807-201ENSMUST00000193520 1168 ntBASIC13.09□□□□□ -0.31
Trav4-4-dv10A0A075B651 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav4-4-dv10A0A075B651 Gm42545-201ENSMUST00000202755 922 ntBASIC13.09□□□□□ -0.31
Trav4-4-dv10A0A075B651 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC13.09□□□□□ -0.31
Trav4-4-dv10A0A075B651 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav4-4-dv10A0A075B651 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav4-4-dv10A0A075B651 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav4-4-dv10A0A075B651 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav4-4-dv10A0A075B651 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trav4-4-dv10A0A075B651 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav4-4-dv10A0A075B651 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
Trav4-4-dv10A0A075B651 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
Trav4-4-dv10A0A075B651 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav4-4-dv10A0A075B651 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
Trav4-4-dv10A0A075B651 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav4-4-dv10A0A075B651 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav4-4-dv10A0A075B651 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav4-4-dv10A0A075B651 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav4-4-dv10A0A075B651 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav4-4-dv10A0A075B651 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav4-4-dv10A0A075B651 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav4-4-dv10A0A075B651 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav4-4-dv10A0A075B651 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav4-4-dv10A0A075B651 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav4-4-dv10A0A075B651 Gm43859-201ENSMUST00000200075 1412 ntBASIC13.08□□□□□ -0.32
Trav4-4-dv10A0A075B651 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav4-4-dv10A0A075B651 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav4-4-dv10A0A075B651 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav4-4-dv10A0A075B651 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav4-4-dv10A0A075B651 Gm10517-202ENSMUST00000192970 758 ntBASIC13.08□□□□□ -0.32
Trav4-4-dv10A0A075B651 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC13.08□□□□□ -0.32
Trav4-4-dv10A0A075B651 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav4-4-dv10A0A075B651 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav4-4-dv10A0A075B651 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav4-4-dv10A0A075B651 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav4-4-dv10A0A075B651 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav4-4-dv10A0A075B651 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.08□□□□□ -0.32
Trav4-4-dv10A0A075B651 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav4-4-dv10A0A075B651 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav4-4-dv10A0A075B651 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav4-4-dv10A0A075B651 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav4-4-dv10A0A075B651 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav4-4-dv10A0A075B651 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav4-4-dv10A0A075B651 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav4-4-dv10A0A075B651 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav4-4-dv10A0A075B651 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav4-4-dv10A0A075B651 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav4-4-dv10A0A075B651 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Trav4-4-dv10A0A075B651 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav4-4-dv10A0A075B651 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav4-4-dv10A0A075B651 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.07□□□□□ -0.32
Trav4-4-dv10A0A075B651 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav4-4-dv10A0A075B651 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav4-4-dv10A0A075B651 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trav4-4-dv10A0A075B651 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trav4-4-dv10A0A075B651 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav4-4-dv10A0A075B651 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav4-4-dv10A0A075B651 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav4-4-dv10A0A075B651 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav4-4-dv10A0A075B651 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav4-4-dv10A0A075B651 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav4-4-dv10A0A075B651 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav4-4-dv10A0A075B651 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav4-4-dv10A0A075B651 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav4-4-dv10A0A075B651 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav4-4-dv10A0A075B651 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav4-4-dv10A0A075B651 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav4-4-dv10A0A075B651 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Trav4-4-dv10A0A075B651 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Trav4-4-dv10A0A075B651 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav4-4-dv10A0A075B651 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav4-4-dv10A0A075B651 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav4-4-dv10A0A075B651 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav4-4-dv10A0A075B651 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav4-4-dv10A0A075B651 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav4-4-dv10A0A075B651 Gm37292-201ENSMUST00000192062 758 ntBASIC13.06□□□□□ -0.32
Trav4-4-dv10A0A075B651 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav4-4-dv10A0A075B651 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav4-4-dv10A0A075B651 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav4-4-dv10A0A075B651 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav4-4-dv10A0A075B651 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav4-4-dv10A0A075B651 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav4-4-dv10A0A075B651 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav4-4-dv10A0A075B651 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav4-4-dv10A0A075B651 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trav4-4-dv10A0A075B651 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav4-4-dv10A0A075B651 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms