Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12-3A0A075B648 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trav12-3A0A075B648 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12-3A0A075B648 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12-3A0A075B648 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12-3A0A075B648 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC12.28□□□□□ -0.44
Trav12-3A0A075B648 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12-3A0A075B648 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12-3A0A075B648 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC12.28□□□□□ -0.44
Trav12-3A0A075B648 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trav12-3A0A075B648 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.28□□□□□ -0.44
Trav12-3A0A075B648 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trav12-3A0A075B648 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12-3A0A075B648 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12-3A0A075B648 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12-3A0A075B648 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12-3A0A075B648 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav12-3A0A075B648 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav12-3A0A075B648 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12-3A0A075B648 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12-3A0A075B648 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12-3A0A075B648 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.28□□□□□ -0.44
Trav12-3A0A075B648 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12-3A0A075B648 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Trav12-3A0A075B648 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12-3A0A075B648 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12-3A0A075B648 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12-3A0A075B648 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12-3A0A075B648 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12-3A0A075B648 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12-3A0A075B648 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12-3A0A075B648 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav12-3A0A075B648 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav12-3A0A075B648 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav12-3A0A075B648 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
Trav12-3A0A075B648 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav12-3A0A075B648 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav12-3A0A075B648 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav12-3A0A075B648 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav12-3A0A075B648 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav12-3A0A075B648 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Trav12-3A0A075B648 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Trav12-3A0A075B648 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav12-3A0A075B648 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav12-3A0A075B648 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12-3A0A075B648 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12-3A0A075B648 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Trav12-3A0A075B648 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12-3A0A075B648 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12-3A0A075B648 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12-3A0A075B648 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trav12-3A0A075B648 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav12-3A0A075B648 AC137127.1-201ENSMUST00000213466 1078 ntBASIC12.27□□□□□ -0.45
Trav12-3A0A075B648 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12-3A0A075B648 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12-3A0A075B648 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trav12-3A0A075B648 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trav12-3A0A075B648 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC12.27□□□□□ -0.45
Trav12-3A0A075B648 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12-3A0A075B648 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12-3A0A075B648 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Trav12-3A0A075B648 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12-3A0A075B648 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav12-3A0A075B648 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12-3A0A075B648 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav12-3A0A075B648 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12-3A0A075B648 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12-3A0A075B648 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12-3A0A075B648 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav12-3A0A075B648 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12-3A0A075B648 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trav12-3A0A075B648 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12-3A0A075B648 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trav12-3A0A075B648 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12-3A0A075B648 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trav12-3A0A075B648 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12-3A0A075B648 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12-3A0A075B648 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12-3A0A075B648 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav12-3A0A075B648 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12-3A0A075B648 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12-3A0A075B648 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12-3A0A075B648 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12-3A0A075B648 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12-3A0A075B648 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12-3A0A075B648 AC115863.1-201ENSMUST00000214815 1813 ntBASIC12.26□□□□□ -0.45
Trav12-3A0A075B648 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12-3A0A075B648 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12-3A0A075B648 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12-3A0A075B648 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav12-3A0A075B648 Gm27801-201ENSMUST00000184174 223 ntBASIC12.26□□□□□ -0.45
Trav12-3A0A075B648 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC12.26□□□□□ -0.45
Trav12-3A0A075B648 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12-3A0A075B648 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12-3A0A075B648 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trav12-3A0A075B648 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12-3A0A075B648 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12-3A0A075B648 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav12-3A0A075B648 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12-3A0A075B648 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms