Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trbv4A0A075B5I2 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Trbv4A0A075B5I2 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trbv4A0A075B5I2 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv4A0A075B5I2 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv4A0A075B5I2 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv4A0A075B5I2 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Trbv4A0A075B5I2 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv4A0A075B5I2 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv4A0A075B5I2 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv4A0A075B5I2 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv4A0A075B5I2 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.82■□□□□ 0.28
Trbv4A0A075B5I2 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Trbv4A0A075B5I2 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv4A0A075B5I2 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.82■□□□□ 0.28
Trbv4A0A075B5I2 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv4A0A075B5I2 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.82■□□□□ 0.28
Trbv4A0A075B5I2 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv4A0A075B5I2 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv4A0A075B5I2 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv4A0A075B5I2 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv4A0A075B5I2 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv4A0A075B5I2 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv4A0A075B5I2 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv4A0A075B5I2 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Trbv4A0A075B5I2 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv4A0A075B5I2 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Trbv4A0A075B5I2 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv4A0A075B5I2 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv4A0A075B5I2 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
Trbv4A0A075B5I2 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv4A0A075B5I2 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv4A0A075B5I2 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.81■□□□□ 0.28
Trbv4A0A075B5I2 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv4A0A075B5I2 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv4A0A075B5I2 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trbv4A0A075B5I2 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv4A0A075B5I2 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv4A0A075B5I2 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv4A0A075B5I2 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv4A0A075B5I2 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
Trbv4A0A075B5I2 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv4A0A075B5I2 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv4A0A075B5I2 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Trbv4A0A075B5I2 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv4A0A075B5I2 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv4A0A075B5I2 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv4A0A075B5I2 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv4A0A075B5I2 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.8■□□□□ 0.28
Trbv4A0A075B5I2 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv4A0A075B5I2 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Trbv4A0A075B5I2 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Trbv4A0A075B5I2 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.8■□□□□ 0.28
Trbv4A0A075B5I2 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.8■□□□□ 0.28
Trbv4A0A075B5I2 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv4A0A075B5I2 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.8■□□□□ 0.28
Trbv4A0A075B5I2 Gm11539-201ENSMUST00000119837 557 ntBASIC16.8■□□□□ 0.28
Trbv4A0A075B5I2 Gm13436-201ENSMUST00000120418 567 ntBASIC16.8■□□□□ 0.28
Trbv4A0A075B5I2 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.8■□□□□ 0.28
Trbv4A0A075B5I2 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv4A0A075B5I2 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.8■□□□□ 0.28
Trbv4A0A075B5I2 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.8■□□□□ 0.28
Trbv4A0A075B5I2 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.8■□□□□ 0.28
Trbv4A0A075B5I2 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv4A0A075B5I2 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv4A0A075B5I2 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv4A0A075B5I2 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.8■□□□□ 0.28
Trbv4A0A075B5I2 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.8■□□□□ 0.28
Trbv4A0A075B5I2 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv4A0A075B5I2 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv4A0A075B5I2 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv4A0A075B5I2 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Trbv4A0A075B5I2 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.79■□□□□ 0.28
Trbv4A0A075B5I2 Gm13186-201ENSMUST00000118031 316 ntBASIC16.79■□□□□ 0.28
Trbv4A0A075B5I2 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv4A0A075B5I2 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.79■□□□□ 0.28
Trbv4A0A075B5I2 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.79■□□□□ 0.28
Trbv4A0A075B5I2 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv4A0A075B5I2 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv4A0A075B5I2 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv4A0A075B5I2 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv4A0A075B5I2 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv4A0A075B5I2 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv4A0A075B5I2 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv4A0A075B5I2 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.79■□□□□ 0.28
Trbv4A0A075B5I2 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv4A0A075B5I2 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv4A0A075B5I2 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
Trbv4A0A075B5I2 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv4A0A075B5I2 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv4A0A075B5I2 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Trbv4A0A075B5I2 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv4A0A075B5I2 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv4A0A075B5I2 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv4A0A075B5I2 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv4A0A075B5I2 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv4A0A075B5I2 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv4A0A075B5I2 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv4A0A075B5I2 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv4A0A075B5I2 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms