Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.83□□□□□ -1.48
HMGCS2P54868 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.83□□□□□ -1.48
HMGCS2P54868 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.83□□□□□ -1.48
HMGCS2P54868 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HMGCS2P54868 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
HMGCS2P54868 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.83□□□□□ -1.48
HMGCS2P54868 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
HMGCS2P54868 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HMGCS2P54868 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.83□□□□□ -1.48
HMGCS2P54868 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HMGCS2P54868 Z98755.1-201ENST00000407015 1384 ntBASIC5.82□□□□□ -1.48
HMGCS2P54868 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HMGCS2P54868 AC073365.1-203ENST00000641055 1992 ntBASIC5.82□□□□□ -1.48
HMGCS2P54868 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.82□□□□□ -1.48
HMGCS2P54868 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HMGCS2P54868 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HMGCS2P54868 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HMGCS2P54868 SNORA70.10-201ENST00000384515 134 ntBASIC5.82□□□□□ -1.48
HMGCS2P54868 RNA5SP332-201ENST00000391063 115 ntBASIC5.82□□□□□ -1.48
HMGCS2P54868 RN7SKP17-201ENST00000411242 351 ntBASIC5.82□□□□□ -1.48
HMGCS2P54868 MTND4LP17-201ENST00000414607 293 ntBASIC5.82□□□□□ -1.48
HMGCS2P54868 GTF2IP5-201ENST00000414608 731 ntBASIC5.82□□□□□ -1.48
HMGCS2P54868 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HMGCS2P54868 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
HMGCS2P54868 AC011005.3-201ENST00000491624 395 ntBASIC5.82□□□□□ -1.48
HMGCS2P54868 PRELID3BP5-201ENST00000508612 460 ntBASIC5.82□□□□□ -1.48
HMGCS2P54868 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.82□□□□□ -1.48
HMGCS2P54868 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.82□□□□□ -1.48
HMGCS2P54868 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.82□□□□□ -1.48
HMGCS2P54868 IGKV1-32-201ENST00000519290 311 ntBASIC5.82□□□□□ -1.48
HMGCS2P54868 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.82□□□□□ -1.48
HMGCS2P54868 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.82□□□□□ -1.48
HMGCS2P54868 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.82□□□□□ -1.48
HMGCS2P54868 AC019322.1-201ENST00000571869 389 ntBASIC5.82□□□□□ -1.48
HMGCS2P54868 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.82□□□□□ -1.48
HMGCS2P54868 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
HMGCS2P54868 MIR6133-201ENST00000617057 108 ntBASIC5.82□□□□□ -1.48
HMGCS2P54868 MIR6839-201ENST00000620425 113 ntBASIC5.82□□□□□ -1.48
HMGCS2P54868 MIR6758-201ENST00000620653 63 ntBASIC5.82□□□□□ -1.48
HMGCS2P54868 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.82□□□□□ -1.48
HMGCS2P54868 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
HMGCS2P54868 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HMGCS2P54868 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.82□□□□□ -1.48
HMGCS2P54868 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.82□□□□□ -1.48
HMGCS2P54868 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HMGCS2P54868 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.82□□□□□ -1.48
HMGCS2P54868 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HMGCS2P54868 AL449283.1-201ENST00000602631 3403 ntBASIC5.81□□□□□ -1.48
HMGCS2P54868 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.81□□□□□ -1.48
HMGCS2P54868 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.81□□□□□ -1.48
HMGCS2P54868 AP000547.3-204ENST00000588548 2523 ntBASIC5.81□□□□□ -1.48
HMGCS2P54868 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
HMGCS2P54868 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.81□□□□□ -1.48
HMGCS2P54868 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.81□□□□□ -1.48
HMGCS2P54868 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
HMGCS2P54868 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HMGCS2P54868 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HMGCS2P54868 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HMGCS2P54868 RPS29P9-201ENST00000440360 171 ntBASIC5.81□□□□□ -1.48
HMGCS2P54868 AC016772.1-201ENST00000444170 1261 ntBASIC5.81□□□□□ -1.48
HMGCS2P54868 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.81□□□□□ -1.48
HMGCS2P54868 AC012512.1-201ENST00000446594 718 ntBASIC5.81□□□□□ -1.48
HMGCS2P54868 AC010733.1-201ENST00000451515 401 ntBASIC5.81□□□□□ -1.48
HMGCS2P54868 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.81□□□□□ -1.48
HMGCS2P54868 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.81□□□□□ -1.48
HMGCS2P54868 AC012339.2-201ENST00000523996 453 ntBASIC5.81□□□□□ -1.48
HMGCS2P54868 MIR7853-201ENST00000584820 132 ntBASIC5.81□□□□□ -1.48
HMGCS2P54868 AL356608.1-201ENST00000610034 820 ntBASIC5.81□□□□□ -1.48
HMGCS2P54868 AC010632.3-201ENST00000611377 369 ntBASIC5.81□□□□□ -1.48
HMGCS2P54868 AC000095.2-202ENST00000637415 154 ntBASIC5.81□□□□□ -1.48
HMGCS2P54868 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HMGCS2P54868 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
HMGCS2P54868 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
HMGCS2P54868 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.81□□□□□ -1.48
HMGCS2P54868 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HMGCS2P54868 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.81□□□□□ -1.48
HMGCS2P54868 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HMGCS2P54868 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.8□□□□□ -1.48
HMGCS2P54868 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HMGCS2P54868 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HMGCS2P54868 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.8□□□□□ -1.48
HMGCS2P54868 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HMGCS2P54868 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.8□□□□□ -1.48
HMGCS2P54868 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.8□□□□□ -1.48
HMGCS2P54868 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HMGCS2P54868 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.8□□□□□ -1.48
HMGCS2P54868 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HMGCS2P54868 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HMGCS2P54868 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
HMGCS2P54868 SNORA62-201ENST00000365493 153 ntBASIC5.8□□□□□ -1.48
HMGCS2P54868 SNORA70.6-201ENST00000383934 134 ntBASIC5.8□□□□□ -1.48
HMGCS2P54868 AL136116.2-201ENST00000404020 785 ntBASIC5.8□□□□□ -1.48
HMGCS2P54868 AL390316.1-201ENST00000406279 553 ntBASIC5.8□□□□□ -1.48
HMGCS2P54868 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.8□□□□□ -1.48
HMGCS2P54868 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.8□□□□□ -1.48
HMGCS2P54868 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.8□□□□□ -1.48
HMGCS2P54868 RPL19P16-201ENST00000433839 588 ntBASIC5.8□□□□□ -1.48
HMGCS2P54868 AC138761.5-201ENST00000433967 325 ntBASIC5.8□□□□□ -1.48
HMGCS2P54868 AURKAPS2-201ENST00000454983 333 ntBASIC5.8□□□□□ -1.48
HMGCS2P54868 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms