Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
SYNE4Q8N205 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SYNE4Q8N205 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.72□□□□□ -1.33
SYNE4Q8N205 ZNF812P-201ENST00000457674 1694 ntBASIC6.72□□□□□ -1.33
SYNE4Q8N205 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.72□□□□□ -1.33
SYNE4Q8N205 SNORA51.8-201ENST00000384234 132 ntBASIC6.72□□□□□ -1.33
SYNE4Q8N205 CHMP1B2P-201ENST00000399581 597 ntBASIC6.72□□□□□ -1.33
SYNE4Q8N205 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6.72□□□□□ -1.33
SYNE4Q8N205 AC211486.3-201ENST00000412694 621 ntBASIC6.72□□□□□ -1.33
SYNE4Q8N205 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC6.72□□□□□ -1.33
SYNE4Q8N205 OR2X1P-201ENST00000421144 687 ntBASIC6.72□□□□□ -1.33
SYNE4Q8N205 AL360081.1-201ENST00000428299 555 ntBASIC6.72□□□□□ -1.33
SYNE4Q8N205 AC114973.1-201ENST00000429057 632 ntBASIC6.72□□□□□ -1.33
SYNE4Q8N205 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC6.72□□□□□ -1.33
SYNE4Q8N205 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC6.72□□□□□ -1.33
SYNE4Q8N205 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.72□□□□□ -1.33
SYNE4Q8N205 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC6.72□□□□□ -1.33
SYNE4Q8N205 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC6.72□□□□□ -1.33
SYNE4Q8N205 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC6.72□□□□□ -1.33
SYNE4Q8N205 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC6.72□□□□□ -1.33
SYNE4Q8N205 ATP5LP5-201ENST00000483050 299 ntBASIC6.72□□□□□ -1.33
SYNE4Q8N205 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC6.72□□□□□ -1.33
SYNE4Q8N205 GAPDHP62-201ENST00000515313 990 ntBASIC6.72□□□□□ -1.33
SYNE4Q8N205 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC6.72□□□□□ -1.33
SYNE4Q8N205 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SYNE4Q8N205 MTCYBP27-201ENST00000555160 670 ntBASIC6.72□□□□□ -1.33
SYNE4Q8N205 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC6.72□□□□□ -1.33
SYNE4Q8N205 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC6.72□□□□□ -1.33
SYNE4Q8N205 AC005412.1-201ENST00000580812 1049 ntBASIC6.72□□□□□ -1.33
SYNE4Q8N205 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.72□□□□□ -1.33
SYNE4Q8N205 AC016590.3-201ENST00000611171 753 ntBASIC6.72□□□□□ -1.33
SYNE4Q8N205 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC6.72□□□□□ -1.33
SYNE4Q8N205 AC022079.1-201ENST00000621546 602 ntBASIC6.72□□□□□ -1.33
SYNE4Q8N205 AP000346.3-201ENST00000622821 210 ntBASIC6.72□□□□□ -1.33
SYNE4Q8N205 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.72□□□□□ -1.33
SYNE4Q8N205 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC6.72□□□□□ -1.33
SYNE4Q8N205 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC6.72□□□□□ -1.33
SYNE4Q8N205 AL445984.1-201ENST00000637834 659 ntBASIC6.72□□□□□ -1.33
SYNE4Q8N205 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC6.72□□□□□ -1.33
SYNE4Q8N205 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SYNE4Q8N205 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
SYNE4Q8N205 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SYNE4Q8N205 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.72□□□□□ -1.33
SYNE4Q8N205 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
SYNE4Q8N205 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
SYNE4Q8N205 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
SYNE4Q8N205 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SYNE4Q8N205 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.72□□□□□ -1.33
SYNE4Q8N205 AC034229.2-201ENST00000566945 2508 ntBASIC6.72□□□□□ -1.33
SYNE4Q8N205 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
SYNE4Q8N205 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.71□□□□□ -1.33
SYNE4Q8N205 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.71□□□□□ -1.33
SYNE4Q8N205 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
SYNE4Q8N205 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.71□□□□□ -1.33
SYNE4Q8N205 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SYNE4Q8N205 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SYNE4Q8N205 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SYNE4Q8N205 RN7SKP104-201ENST00000362605 328 ntBASIC6.71□□□□□ -1.34
SYNE4Q8N205 RNA5SP123-201ENST00000363244 119 ntBASIC6.71□□□□□ -1.34
SYNE4Q8N205 RNU6-883P-201ENST00000384597 107 ntBASIC6.71□□□□□ -1.34
SYNE4Q8N205 AL607077.1-201ENST00000401718 499 ntBASIC6.71□□□□□ -1.34
SYNE4Q8N205 RN7SKP126-201ENST00000411143 300 ntBASIC6.71□□□□□ -1.34
SYNE4Q8N205 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC6.71□□□□□ -1.34
SYNE4Q8N205 MAPRE1P3-201ENST00000435438 796 ntBASIC6.71□□□□□ -1.34
SYNE4Q8N205 GAPDHP25-201ENST00000447061 1001 ntBASIC6.71□□□□□ -1.34
SYNE4Q8N205 AC009963.2-201ENST00000453431 138 ntBASIC6.71□□□□□ -1.34
SYNE4Q8N205 RPS29P33-201ENST00000456717 146 ntBASIC6.71□□□□□ -1.34
SYNE4Q8N205 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC6.71□□□□□ -1.34
SYNE4Q8N205 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC6.71□□□□□ -1.34
SYNE4Q8N205 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC6.71□□□□□ -1.34
SYNE4Q8N205 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.71□□□□□ -1.34
SYNE4Q8N205 AP001804.1-201ENST00000526868 919 ntBASIC6.71□□□□□ -1.34
SYNE4Q8N205 AC134349.2-201ENST00000535136 910 ntBASIC6.71□□□□□ -1.34
SYNE4Q8N205 YWHABP2-201ENST00000540201 713 ntBASIC6.71□□□□□ -1.34
SYNE4Q8N205 AC092490.3-201ENST00000545370 572 ntBASIC6.71□□□□□ -1.34
SYNE4Q8N205 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.71□□□□□ -1.34
SYNE4Q8N205 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
SYNE4Q8N205 AL512310.9-201ENST00000553311 948 ntBASIC6.71□□□□□ -1.34
SYNE4Q8N205 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC6.71□□□□□ -1.34
SYNE4Q8N205 AL049838.1-201ENST00000563647 981 ntBASIC6.71□□□□□ -1.34
SYNE4Q8N205 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC6.71□□□□□ -1.34
SYNE4Q8N205 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC6.71□□□□□ -1.34
SYNE4Q8N205 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC6.71□□□□□ -1.34
SYNE4Q8N205 CR589904.2-201ENST00000612533 440 ntBASIC6.71□□□□□ -1.34
SYNE4Q8N205 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.34
SYNE4Q8N205 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SYNE4Q8N205 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
SYNE4Q8N205 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SYNE4Q8N205 AC006206.1-201ENST00000544842 3387 ntBASIC6.71□□□□□ -1.34
SYNE4Q8N205 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SYNE4Q8N205 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
SYNE4Q8N205 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SYNE4Q8N205 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SYNE4Q8N205 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SYNE4Q8N205 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.71□□□□□ -1.34
SYNE4Q8N205 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
SYNE4Q8N205 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.7□□□□□ -1.34
SYNE4Q8N205 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
SYNE4Q8N205 AC026951.1-201ENST00000559530 2459 ntBASIC6.7□□□□□ -1.34
SYNE4Q8N205 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms