Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AC018552.1-201ENST00000562099 811 ntBASIC5.49□□□□□ -1.53
TM9SF3Q9HD45 AC009852.2-201ENST00000567898 485 ntBASIC5.49□□□□□ -1.53
TM9SF3Q9HD45 MIR3691-201ENST00000578066 90 ntBASIC5.49□□□□□ -1.53
TM9SF3Q9HD45 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.49□□□□□ -1.53
TM9SF3Q9HD45 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.49□□□□□ -1.53
TM9SF3Q9HD45 AC116651.1-201ENST00000609724 556 ntBASIC5.49□□□□□ -1.53
TM9SF3Q9HD45 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.49□□□□□ -1.53
TM9SF3Q9HD45 AP003400.2-201ENST00000624036 666 ntBASIC5.49□□□□□ -1.53
TM9SF3Q9HD45 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.49□□□□□ -1.53
TM9SF3Q9HD45 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
TM9SF3Q9HD45 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TM9SF3Q9HD45 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
TM9SF3Q9HD45 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TM9SF3Q9HD45 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
TM9SF3Q9HD45 MIR133B-201ENST00000362210 119 ntBASIC5.48□□□□□ -1.53
TM9SF3Q9HD45 U3.2-201ENST00000362981 210 ntBASIC5.48□□□□□ -1.53
TM9SF3Q9HD45 RNU6-1331P-201ENST00000363658 106 ntBASIC5.48□□□□□ -1.53
TM9SF3Q9HD45 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TM9SF3Q9HD45 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TM9SF3Q9HD45 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TM9SF3Q9HD45 RPL12P43-201ENST00000420608 499 ntBASIC5.48□□□□□ -1.53
TM9SF3Q9HD45 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.48□□□□□ -1.53
TM9SF3Q9HD45 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.48□□□□□ -1.53
TM9SF3Q9HD45 AC108075.1-201ENST00000424692 529 ntBASIC5.48□□□□□ -1.53
TM9SF3Q9HD45 FAM96AP1-201ENST00000430879 482 ntBASIC5.48□□□□□ -1.53
TM9SF3Q9HD45 RAB9AP5-201ENST00000437794 597 ntBASIC5.48□□□□□ -1.53
TM9SF3Q9HD45 RAB9AP2-201ENST00000443911 597 ntBASIC5.48□□□□□ -1.53
TM9SF3Q9HD45 MED28P3-201ENST00000444288 531 ntBASIC5.48□□□□□ -1.53
TM9SF3Q9HD45 AC092106.1-201ENST00000444291 373 ntBASIC5.48□□□□□ -1.53
TM9SF3Q9HD45 RPS23P9-201ENST00000448848 438 ntBASIC5.48□□□□□ -1.53
TM9SF3Q9HD45 OR11I1P-201ENST00000486033 954 ntBASIC5.48□□□□□ -1.53
TM9SF3Q9HD45 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.48□□□□□ -1.53
TM9SF3Q9HD45 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.48□□□□□ -1.53
TM9SF3Q9HD45 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.48□□□□□ -1.53
TM9SF3Q9HD45 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.48□□□□□ -1.53
TM9SF3Q9HD45 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.48□□□□□ -1.53
TM9SF3Q9HD45 AC084759.1-201ENST00000561168 290 ntBASIC5.48□□□□□ -1.53
TM9SF3Q9HD45 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.48□□□□□ -1.53
TM9SF3Q9HD45 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.48□□□□□ -1.53
TM9SF3Q9HD45 MIR4660-201ENST00000583549 74 ntBASIC5.48□□□□□ -1.53
TM9SF3Q9HD45 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.48□□□□□ -1.53
TM9SF3Q9HD45 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.48□□□□□ -1.53
TM9SF3Q9HD45 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.48□□□□□ -1.53
TM9SF3Q9HD45 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.48□□□□□ -1.53
TM9SF3Q9HD45 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.48□□□□□ -1.53
TM9SF3Q9HD45 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.48□□□□□ -1.53
TM9SF3Q9HD45 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
TM9SF3Q9HD45 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TM9SF3Q9HD45 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TM9SF3Q9HD45 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
TM9SF3Q9HD45 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TM9SF3Q9HD45 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.48□□□□□ -1.53
TM9SF3Q9HD45 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TM9SF3Q9HD45 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
TM9SF3Q9HD45 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TM9SF3Q9HD45 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.47□□□□□ -1.53
TM9SF3Q9HD45 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TM9SF3Q9HD45 ZNF733P-202ENST00000444809 1573 ntBASIC5.47□□□□□ -1.53
TM9SF3Q9HD45 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TM9SF3Q9HD45 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TM9SF3Q9HD45 OR13C3-201ENST00000374781 1108 ntBASIC5.47□□□□□ -1.53
TM9SF3Q9HD45 MIR585-201ENST00000384887 94 ntBASIC5.47□□□□□ -1.53
TM9SF3Q9HD45 RNA5SP91-201ENST00000390902 119 ntBASIC5.47□□□□□ -1.53
TM9SF3Q9HD45 HMGB3P7-201ENST00000400214 611 ntBASIC5.47□□□□□ -1.53
TM9SF3Q9HD45 AL133270.1-201ENST00000402635 279 ntBASIC5.47□□□□□ -1.53
TM9SF3Q9HD45 AL009179.1-201ENST00000406085 265 ntBASIC5.47□□□□□ -1.53
TM9SF3Q9HD45 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.47□□□□□ -1.53
TM9SF3Q9HD45 AC079809.1-201ENST00000415468 276 ntBASIC5.47□□□□□ -1.53
TM9SF3Q9HD45 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.47□□□□□ -1.53
TM9SF3Q9HD45 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.47□□□□□ -1.53
TM9SF3Q9HD45 TRGV7-201ENST00000427089 353 ntBASIC5.47□□□□□ -1.53
TM9SF3Q9HD45 DSTNP5-201ENST00000427921 523 ntBASIC5.47□□□□□ -1.53
TM9SF3Q9HD45 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.47□□□□□ -1.53
TM9SF3Q9HD45 CEACAMP7-201ENST00000444105 496 ntBASIC5.47□□□□□ -1.53
TM9SF3Q9HD45 GAPDHP14-201ENST00000450472 937 ntBASIC5.47□□□□□ -1.53
TM9SF3Q9HD45 AL035090.1-201ENST00000454835 332 ntBASIC5.47□□□□□ -1.53
TM9SF3Q9HD45 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.47□□□□□ -1.53
TM9SF3Q9HD45 RPS7P6-201ENST00000485777 579 ntBASIC5.47□□□□□ -1.53
TM9SF3Q9HD45 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.47□□□□□ -1.53
TM9SF3Q9HD45 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.47□□□□□ -1.53
TM9SF3Q9HD45 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.47□□□□□ -1.53
TM9SF3Q9HD45 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.47□□□□□ -1.53
TM9SF3Q9HD45 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.47□□□□□ -1.53
TM9SF3Q9HD45 AC139697.1-201ENST00000548429 745 ntBASIC5.47□□□□□ -1.53
TM9SF3Q9HD45 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.47□□□□□ -1.53
TM9SF3Q9HD45 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.47□□□□□ -1.53
TM9SF3Q9HD45 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.47□□□□□ -1.53
TM9SF3Q9HD45 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.47□□□□□ -1.53
TM9SF3Q9HD45 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.47□□□□□ -1.53
TM9SF3Q9HD45 AC087763.1-201ENST00000603391 286 ntBASIC5.47□□□□□ -1.53
TM9SF3Q9HD45 NANOGP3-201ENST00000605855 286 ntBASIC5.47□□□□□ -1.53
TM9SF3Q9HD45 AL353729.2-201ENST00000605859 1249 ntBASIC5.47□□□□□ -1.53
TM9SF3Q9HD45 AC239803.2-201ENST00000610161 430 ntBASIC5.47□□□□□ -1.53
TM9SF3Q9HD45 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.47□□□□□ -1.53
TM9SF3Q9HD45 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TM9SF3Q9HD45 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.47□□□□□ -1.53
TM9SF3Q9HD45 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
TM9SF3Q9HD45 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
TM9SF3Q9HD45 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.47□□□□□ -1.53
TM9SF3Q9HD45 AC144833.1-201ENST00000567953 4089 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms