Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
TRIM38O00635 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
TRIM38O00635 AC123769.1-201ENST00000530992 3192 ntBASIC5.92□□□□□ -1.46
TRIM38O00635 RBPJP7-201ENST00000442803 1447 ntBASIC5.92□□□□□ -1.46
TRIM38O00635 RBPJP5-201ENST00000449433 1447 ntBASIC5.92□□□□□ -1.46
TRIM38O00635 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TRIM38O00635 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
TRIM38O00635 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TRIM38O00635 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TRIM38O00635 AC027088.4-201ENST00000611559 1947 ntBASIC5.92□□□□□ -1.46
TRIM38O00635 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
TRIM38O00635 MIR16-2-201ENST00000362117 81 ntBASIC5.92□□□□□ -1.46
TRIM38O00635 RNA5SP375-201ENST00000362975 119 ntBASIC5.92□□□□□ -1.46
TRIM38O00635 RNU6-252P-201ENST00000363232 107 ntBASIC5.92□□□□□ -1.46
TRIM38O00635 MIR620-201ENST00000385232 95 ntBASIC5.92□□□□□ -1.46
TRIM38O00635 AC104297.1-201ENST00000393779 870 ntBASIC5.92□□□□□ -1.46
TRIM38O00635 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
TRIM38O00635 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.92□□□□□ -1.46
TRIM38O00635 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC5.92□□□□□ -1.46
TRIM38O00635 MTCO2P1-201ENST00000424648 477 ntBASIC5.92□□□□□ -1.46
TRIM38O00635 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.92□□□□□ -1.46
TRIM38O00635 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC5.92□□□□□ -1.46
TRIM38O00635 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.92□□□□□ -1.46
TRIM38O00635 YWHAEP1-201ENST00000453697 763 ntBASIC5.92□□□□□ -1.46
TRIM38O00635 GEMIN2P1-201ENST00000454246 752 ntBASIC5.92□□□□□ -1.46
TRIM38O00635 TVP23BP2-201ENST00000455082 615 ntBASIC5.92□□□□□ -1.46
TRIM38O00635 AL122020.1-201ENST00000472287 459 ntBASIC5.92□□□□□ -1.46
TRIM38O00635 AC068587.2-201ENST00000478386 781 ntBASIC5.92□□□□□ -1.46
TRIM38O00635 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.92□□□□□ -1.46
TRIM38O00635 TRBV5-2-201ENST00000489095 273 ntBASIC5.92□□□□□ -1.46
TRIM38O00635 AC098862.1-201ENST00000504991 413 ntBASIC5.92□□□□□ -1.46
TRIM38O00635 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.92□□□□□ -1.46
TRIM38O00635 AC119751.4-201ENST00000507498 357 ntBASIC5.92□□□□□ -1.46
TRIM38O00635 AC112518.2-201ENST00000508565 425 ntBASIC5.92□□□□□ -1.46
TRIM38O00635 AC121161.1-201ENST00000510606 652 ntBASIC5.92□□□□□ -1.46
TRIM38O00635 AC027308.1-201ENST00000517993 110 ntBASIC5.92□□□□□ -1.46
TRIM38O00635 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.92□□□□□ -1.46
TRIM38O00635 HAUS1P3-201ENST00000523909 662 ntBASIC5.92□□□□□ -1.46
TRIM38O00635 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.92□□□□□ -1.46
TRIM38O00635 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.92□□□□□ -1.46
TRIM38O00635 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
TRIM38O00635 AC244502.2-201ENST00000543361 851 ntBASIC5.92□□□□□ -1.46
TRIM38O00635 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.92□□□□□ -1.46
TRIM38O00635 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC5.92□□□□□ -1.46
TRIM38O00635 VN1R87P-201ENST00000596706 487 ntBASIC5.92□□□□□ -1.46
TRIM38O00635 AC114878.2-201ENST00000604863 1251 ntBASIC5.92□□□□□ -1.46
TRIM38O00635 RPL12P48-201ENST00000605620 304 ntBASIC5.92□□□□□ -1.46
TRIM38O00635 AL135786.2-201ENST00000608422 615 ntBASIC5.92□□□□□ -1.46
TRIM38O00635 AC096861.1-201ENST00000616652 240 ntBASIC5.92□□□□□ -1.46
TRIM38O00635 MIR6826-201ENST00000617808 98 ntBASIC5.92□□□□□ -1.46
TRIM38O00635 AC091046.2-201ENST00000620775 665 ntBASIC5.92□□□□□ -1.46
TRIM38O00635 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC5.92□□□□□ -1.46
TRIM38O00635 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.92□□□□□ -1.46
TRIM38O00635 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.92□□□□□ -1.46
TRIM38O00635 CU459211.1-201ENST00000635667 749 ntBASIC5.92□□□□□ -1.46
TRIM38O00635 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
TRIM38O00635 HSPA8P19-201ENST00000505359 1517 ntBASIC5.92□□□□□ -1.46
TRIM38O00635 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
TRIM38O00635 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
TRIM38O00635 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.92□□□□□ -1.46
TRIM38O00635 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TRIM38O00635 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.92□□□□□ -1.46
TRIM38O00635 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TRIM38O00635 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TRIM38O00635 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
TRIM38O00635 GNL2P1-201ENST00000451274 2190 ntBASIC5.91□□□□□ -1.46
TRIM38O00635 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM38O00635 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
TRIM38O00635 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
TRIM38O00635 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.91□□□□□ -1.46
TRIM38O00635 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM38O00635 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
TRIM38O00635 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM38O00635 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.91□□□□□ -1.46
TRIM38O00635 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM38O00635 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM38O00635 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.91□□□□□ -1.46
TRIM38O00635 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM38O00635 OR13C1P-202ENST00000641378 2919 ntBASIC5.91□□□□□ -1.46
TRIM38O00635 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM38O00635 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM38O00635 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM38O00635 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
TRIM38O00635 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
TRIM38O00635 AC016769.2-201ENST00000414815 475 ntBASIC5.91□□□□□ -1.46
TRIM38O00635 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC5.91□□□□□ -1.46
TRIM38O00635 BMS1P13-201ENST00000417301 885 ntBASIC5.91□□□□□ -1.46
TRIM38O00635 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.91□□□□□ -1.46
TRIM38O00635 BX510359.3-201ENST00000422168 306 ntBASIC5.91□□□□□ -1.46
TRIM38O00635 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.91□□□□□ -1.46
TRIM38O00635 AL121776.1-201ENST00000429337 372 ntBASIC5.91□□□□□ -1.46
TRIM38O00635 TUBB4BP6-201ENST00000437576 479 ntBASIC5.91□□□□□ -1.46
TRIM38O00635 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.91□□□□□ -1.46
TRIM38O00635 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.91□□□□□ -1.46
TRIM38O00635 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.91□□□□□ -1.46
TRIM38O00635 BMS1P10-201ENST00000443754 1120 ntBASIC5.91□□□□□ -1.46
TRIM38O00635 AL512593.1-201ENST00000444758 779 ntBASIC5.91□□□□□ -1.46
TRIM38O00635 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.91□□□□□ -1.46
TRIM38O00635 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.91□□□□□ -1.46
TRIM38O00635 RPL7P55-201ENST00000450522 746 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms