Protein–RNA interactions for Protein: W4VSP6

Gm5538, MCG67716, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5538W4VSP6 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5538W4VSP6 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5538W4VSP6 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5538W4VSP6 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5538W4VSP6 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Gm5538W4VSP6 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.15■□□□□ 0.34
Gm5538W4VSP6 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5538W4VSP6 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5538W4VSP6 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
Gm5538W4VSP6 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Gm5538W4VSP6 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5538W4VSP6 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5538W4VSP6 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Gm5538W4VSP6 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5538W4VSP6 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5538W4VSP6 Gm16061-201ENSMUST00000122167 857 ntBASIC17.14■□□□□ 0.33
Gm5538W4VSP6 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5538W4VSP6 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
Gm5538W4VSP6 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5538W4VSP6 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Gm5538W4VSP6 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Gm5538W4VSP6 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Gm5538W4VSP6 Phf7-203ENSMUST00000226565 1971 ntBASIC17.14■□□□□ 0.33
Gm5538W4VSP6 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5538W4VSP6 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5538W4VSP6 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.14■□□□□ 0.33
Gm5538W4VSP6 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5538W4VSP6 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5538W4VSP6 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5538W4VSP6 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5538W4VSP6 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5538W4VSP6 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.13■□□□□ 0.33
Gm5538W4VSP6 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5538W4VSP6 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Gm5538W4VSP6 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5538W4VSP6 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Gm5538W4VSP6 Actl10-202ENSMUST00000226583 1501 ntBASIC17.13■□□□□ 0.33
Gm5538W4VSP6 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5538W4VSP6 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5538W4VSP6 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5538W4VSP6 Gm6433-201ENSMUST00000118634 875 ntBASIC17.13■□□□□ 0.33
Gm5538W4VSP6 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.13■□□□□ 0.33
Gm5538W4VSP6 Gm7213-201ENSMUST00000215977 950 ntBASIC17.13■□□□□ 0.33
Gm5538W4VSP6 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5538W4VSP6 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Gm5538W4VSP6 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5538W4VSP6 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5538W4VSP6 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Gm5538W4VSP6 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Gm5538W4VSP6 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5538W4VSP6 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5538W4VSP6 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5538W4VSP6 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5538W4VSP6 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5538W4VSP6 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Gm5538W4VSP6 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5538W4VSP6 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5538W4VSP6 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5538W4VSP6 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Gm5538W4VSP6 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5538W4VSP6 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5538W4VSP6 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5538W4VSP6 Mir5130-201ENSMUST00000175160 84 ntBASIC17.12■□□□□ 0.33
Gm5538W4VSP6 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.12■□□□□ 0.33
Gm5538W4VSP6 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.12■□□□□ 0.33
Gm5538W4VSP6 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.12■□□□□ 0.33
Gm5538W4VSP6 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Gm5538W4VSP6 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Gm5538W4VSP6 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5538W4VSP6 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Gm5538W4VSP6 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5538W4VSP6 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5538W4VSP6 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5538W4VSP6 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5538W4VSP6 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5538W4VSP6 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Gm5538W4VSP6 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5538W4VSP6 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Gm5538W4VSP6 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5538W4VSP6 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Gm5538W4VSP6 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5538W4VSP6 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5538W4VSP6 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5538W4VSP6 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5538W4VSP6 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5538W4VSP6 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5538W4VSP6 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5538W4VSP6 Gm13186-201ENSMUST00000118031 316 ntBASIC17.11■□□□□ 0.33
Gm5538W4VSP6 Gm45058-201ENSMUST00000205810 766 ntBASIC17.11■□□□□ 0.33
Gm5538W4VSP6 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.11■□□□□ 0.33
Gm5538W4VSP6 Gm18959-201ENSMUST00000208954 655 ntBASIC17.11■□□□□ 0.33
Gm5538W4VSP6 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.11■□□□□ 0.33
Gm5538W4VSP6 Gm9987-201ENSMUST00000069768 567 ntBASIC17.11■□□□□ 0.33
Gm5538W4VSP6 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5538W4VSP6 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5538W4VSP6 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5538W4VSP6 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Gm5538W4VSP6 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5538W4VSP6 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Gm5538W4VSP6 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms