Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
PdfS4R2K0 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
PdfS4R2K0 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
PdfS4R2K0 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
PdfS4R2K0 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
PdfS4R2K0 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
PdfS4R2K0 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
PdfS4R2K0 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
PdfS4R2K0 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PdfS4R2K0 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
PdfS4R2K0 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
PdfS4R2K0 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC12.92□□□□□ -0.34
PdfS4R2K0 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC12.92□□□□□ -0.34
PdfS4R2K0 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PdfS4R2K0 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC12.92□□□□□ -0.34
PdfS4R2K0 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
PdfS4R2K0 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PdfS4R2K0 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PdfS4R2K0 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC12.92□□□□□ -0.34
PdfS4R2K0 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
PdfS4R2K0 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC12.92□□□□□ -0.34
PdfS4R2K0 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PdfS4R2K0 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PdfS4R2K0 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PdfS4R2K0 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PdfS4R2K0 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PdfS4R2K0 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
PdfS4R2K0 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PdfS4R2K0 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
PdfS4R2K0 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PdfS4R2K0 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
PdfS4R2K0 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
PdfS4R2K0 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PdfS4R2K0 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
PdfS4R2K0 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PdfS4R2K0 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
PdfS4R2K0 Gm44544-201ENSMUST00000207052 1844 ntBASIC12.92□□□□□ -0.34
PdfS4R2K0 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PdfS4R2K0 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
PdfS4R2K0 AC131586.2-201ENSMUST00000228370 1512 ntBASIC12.92□□□□□ -0.34
PdfS4R2K0 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PdfS4R2K0 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC12.92□□□□□ -0.34
PdfS4R2K0 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PdfS4R2K0 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
PdfS4R2K0 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PdfS4R2K0 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PdfS4R2K0 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
PdfS4R2K0 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
PdfS4R2K0 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PdfS4R2K0 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PdfS4R2K0 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PdfS4R2K0 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PdfS4R2K0 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
PdfS4R2K0 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
PdfS4R2K0 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC12.91□□□□□ -0.34
PdfS4R2K0 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
PdfS4R2K0 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC12.91□□□□□ -0.34
PdfS4R2K0 Gm4968-201ENSMUST00000071458 858 ntBASIC12.91□□□□□ -0.34
PdfS4R2K0 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
PdfS4R2K0 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
PdfS4R2K0 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
PdfS4R2K0 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PdfS4R2K0 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PdfS4R2K0 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PdfS4R2K0 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PdfS4R2K0 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PdfS4R2K0 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PdfS4R2K0 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PdfS4R2K0 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PdfS4R2K0 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PdfS4R2K0 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
PdfS4R2K0 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PdfS4R2K0 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PdfS4R2K0 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
PdfS4R2K0 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
PdfS4R2K0 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PdfS4R2K0 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC12.9□□□□□ -0.34
PdfS4R2K0 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
PdfS4R2K0 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PdfS4R2K0 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PdfS4R2K0 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PdfS4R2K0 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC12.9□□□□□ -0.34
PdfS4R2K0 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PdfS4R2K0 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
PdfS4R2K0 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC12.9□□□□□ -0.34
PdfS4R2K0 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
PdfS4R2K0 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PdfS4R2K0 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PdfS4R2K0 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PdfS4R2K0 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PdfS4R2K0 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
PdfS4R2K0 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
PdfS4R2K0 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PdfS4R2K0 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC12.9□□□□□ -0.34
PdfS4R2K0 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
PdfS4R2K0 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC12.9□□□□□ -0.34
PdfS4R2K0 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PdfS4R2K0 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC12.9□□□□□ -0.34
PdfS4R2K0 Gm5408-201ENSMUST00000197998 747 ntBASIC12.9□□□□□ -0.34
PdfS4R2K0 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms