Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
H2afb2S4R1M3 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
H2afb2S4R1M3 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H2afb2S4R1M3 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
H2afb2S4R1M3 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H2afb2S4R1M3 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.81■□□□□ 0.28
H2afb2S4R1M3 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H2afb2S4R1M3 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
H2afb2S4R1M3 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
H2afb2S4R1M3 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H2afb2S4R1M3 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H2afb2S4R1M3 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
H2afb2S4R1M3 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.81■□□□□ 0.28
H2afb2S4R1M3 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
H2afb2S4R1M3 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H2afb2S4R1M3 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H2afb2S4R1M3 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H2afb2S4R1M3 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.81■□□□□ 0.28
H2afb2S4R1M3 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
H2afb2S4R1M3 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
H2afb2S4R1M3 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H2afb2S4R1M3 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.81■□□□□ 0.28
H2afb2S4R1M3 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
H2afb2S4R1M3 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
H2afb2S4R1M3 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
H2afb2S4R1M3 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
H2afb2S4R1M3 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.8■□□□□ 0.28
H2afb2S4R1M3 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
H2afb2S4R1M3 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
H2afb2S4R1M3 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
H2afb2S4R1M3 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
H2afb2S4R1M3 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
H2afb2S4R1M3 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
H2afb2S4R1M3 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
H2afb2S4R1M3 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.8■□□□□ 0.28
H2afb2S4R1M3 Gm37055-201ENSMUST00000191866 133 ntBASIC16.8■□□□□ 0.28
H2afb2S4R1M3 Gm30025-201ENSMUST00000218555 728 ntBASIC16.8■□□□□ 0.28
H2afb2S4R1M3 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
H2afb2S4R1M3 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
H2afb2S4R1M3 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
H2afb2S4R1M3 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
H2afb2S4R1M3 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
H2afb2S4R1M3 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
H2afb2S4R1M3 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.8■□□□□ 0.28
H2afb2S4R1M3 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
H2afb2S4R1M3 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
H2afb2S4R1M3 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
H2afb2S4R1M3 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
H2afb2S4R1M3 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
H2afb2S4R1M3 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
H2afb2S4R1M3 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
H2afb2S4R1M3 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.79■□□□□ 0.28
H2afb2S4R1M3 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
H2afb2S4R1M3 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
H2afb2S4R1M3 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
H2afb2S4R1M3 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
H2afb2S4R1M3 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
H2afb2S4R1M3 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
H2afb2S4R1M3 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
H2afb2S4R1M3 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
H2afb2S4R1M3 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.79■□□□□ 0.28
H2afb2S4R1M3 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
H2afb2S4R1M3 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
H2afb2S4R1M3 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.79■□□□□ 0.28
H2afb2S4R1M3 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.79■□□□□ 0.28
H2afb2S4R1M3 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.79■□□□□ 0.28
H2afb2S4R1M3 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
H2afb2S4R1M3 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
H2afb2S4R1M3 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
H2afb2S4R1M3 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
H2afb2S4R1M3 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
H2afb2S4R1M3 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
H2afb2S4R1M3 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
H2afb2S4R1M3 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
H2afb2S4R1M3 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
H2afb2S4R1M3 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
H2afb2S4R1M3 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
H2afb2S4R1M3 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
H2afb2S4R1M3 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
H2afb2S4R1M3 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
H2afb2S4R1M3 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
H2afb2S4R1M3 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
H2afb2S4R1M3 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
H2afb2S4R1M3 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
H2afb2S4R1M3 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.78■□□□□ 0.28
H2afb2S4R1M3 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
H2afb2S4R1M3 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
H2afb2S4R1M3 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.78■□□□□ 0.28
H2afb2S4R1M3 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.78■□□□□ 0.28
H2afb2S4R1M3 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
H2afb2S4R1M3 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
H2afb2S4R1M3 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
H2afb2S4R1M3 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.78■□□□□ 0.28
H2afb2S4R1M3 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
H2afb2S4R1M3 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
H2afb2S4R1M3 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.78■□□□□ 0.28
H2afb2S4R1M3 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
H2afb2S4R1M3 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
H2afb2S4R1M3 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
H2afb2S4R1M3 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms