Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
H2afb1S4R1E0 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
H2afb1S4R1E0 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
H2afb1S4R1E0 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
H2afb1S4R1E0 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.27■□□□□ 0.04
H2afb1S4R1E0 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
H2afb1S4R1E0 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
H2afb1S4R1E0 Gm12382-201ENSMUST00000122005 922 ntBASIC15.27■□□□□ 0.04
H2afb1S4R1E0 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC15.27■□□□□ 0.04
H2afb1S4R1E0 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.27■□□□□ 0.04
H2afb1S4R1E0 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
H2afb1S4R1E0 Gm42545-201ENSMUST00000202755 922 ntBASIC15.27■□□□□ 0.04
H2afb1S4R1E0 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
H2afb1S4R1E0 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.27■□□□□ 0.04
H2afb1S4R1E0 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
H2afb1S4R1E0 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
H2afb1S4R1E0 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
H2afb1S4R1E0 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
H2afb1S4R1E0 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
H2afb1S4R1E0 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
H2afb1S4R1E0 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
H2afb1S4R1E0 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
H2afb1S4R1E0 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
H2afb1S4R1E0 Gm12441-201ENSMUST00000121806 588 ntBASIC15.26■□□□□ 0.03
H2afb1S4R1E0 Gm27275-201ENSMUST00000184318 272 ntBASIC15.26■□□□□ 0.03
H2afb1S4R1E0 Gm4974-201ENSMUST00000209974 875 ntBASIC15.26■□□□□ 0.03
H2afb1S4R1E0 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
H2afb1S4R1E0 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
H2afb1S4R1E0 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
H2afb1S4R1E0 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
H2afb1S4R1E0 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
H2afb1S4R1E0 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.26■□□□□ 0.03
H2afb1S4R1E0 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.26■□□□□ 0.03
H2afb1S4R1E0 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
H2afb1S4R1E0 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H2afb1S4R1E0 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H2afb1S4R1E0 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
H2afb1S4R1E0 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H2afb1S4R1E0 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H2afb1S4R1E0 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H2afb1S4R1E0 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
H2afb1S4R1E0 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H2afb1S4R1E0 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
H2afb1S4R1E0 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H2afb1S4R1E0 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H2afb1S4R1E0 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
H2afb1S4R1E0 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
H2afb1S4R1E0 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
H2afb1S4R1E0 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
H2afb1S4R1E0 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.25■□□□□ 0.03
H2afb1S4R1E0 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.25■□□□□ 0.03
H2afb1S4R1E0 Gm20049-201ENSMUST00000219950 730 ntBASIC15.25■□□□□ 0.03
H2afb1S4R1E0 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC15.25■□□□□ 0.03
H2afb1S4R1E0 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H2afb1S4R1E0 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H2afb1S4R1E0 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H2afb1S4R1E0 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
H2afb1S4R1E0 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
H2afb1S4R1E0 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
H2afb1S4R1E0 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H2afb1S4R1E0 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H2afb1S4R1E0 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
H2afb1S4R1E0 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H2afb1S4R1E0 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
H2afb1S4R1E0 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
H2afb1S4R1E0 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H2afb1S4R1E0 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
H2afb1S4R1E0 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.24■□□□□ 0.03
H2afb1S4R1E0 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
H2afb1S4R1E0 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H2afb1S4R1E0 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
H2afb1S4R1E0 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
H2afb1S4R1E0 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
H2afb1S4R1E0 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
H2afb1S4R1E0 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
H2afb1S4R1E0 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
H2afb1S4R1E0 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
H2afb1S4R1E0 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
H2afb1S4R1E0 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H2afb1S4R1E0 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
H2afb1S4R1E0 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
H2afb1S4R1E0 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
H2afb1S4R1E0 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
H2afb1S4R1E0 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
H2afb1S4R1E0 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
H2afb1S4R1E0 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
H2afb1S4R1E0 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
H2afb1S4R1E0 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
H2afb1S4R1E0 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
H2afb1S4R1E0 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
H2afb1S4R1E0 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
H2afb1S4R1E0 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
H2afb1S4R1E0 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
H2afb1S4R1E0 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
H2afb1S4R1E0 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
H2afb1S4R1E0 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
H2afb1S4R1E0 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.22■□□□□ 0.03
H2afb1S4R1E0 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
H2afb1S4R1E0 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
H2afb1S4R1E0 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms