Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mrpl40Q9Z2Q5 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.81■□□□□ 0.28
Mrpl40Q9Z2Q5 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mrpl40Q9Z2Q5 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mrpl40Q9Z2Q5 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Mrpl40Q9Z2Q5 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.81■□□□□ 0.28
Mrpl40Q9Z2Q5 Gm18032-201ENSMUST00000222541 538 ntBASIC16.81■□□□□ 0.28
Mrpl40Q9Z2Q5 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Mrpl40Q9Z2Q5 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mrpl40Q9Z2Q5 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mrpl40Q9Z2Q5 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Mrpl40Q9Z2Q5 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mrpl40Q9Z2Q5 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Mrpl40Q9Z2Q5 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mrpl40Q9Z2Q5 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Mrpl40Q9Z2Q5 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Mrpl40Q9Z2Q5 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Mrpl40Q9Z2Q5 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.8■□□□□ 0.28
Mrpl40Q9Z2Q5 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.8■□□□□ 0.28
Mrpl40Q9Z2Q5 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mrpl40Q9Z2Q5 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Mrpl40Q9Z2Q5 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mrpl40Q9Z2Q5 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mrpl40Q9Z2Q5 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mrpl40Q9Z2Q5 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Mrpl40Q9Z2Q5 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mrpl40Q9Z2Q5 Gm7638-201ENSMUST00000121348 967 ntBASIC16.8■□□□□ 0.28
Mrpl40Q9Z2Q5 AA414768-201ENSMUST00000121924 1257 ntBASIC16.8■□□□□ 0.28
Mrpl40Q9Z2Q5 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Mrpl40Q9Z2Q5 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.8■□□□□ 0.28
Mrpl40Q9Z2Q5 Gm22697-201ENSMUST00000175194 63 ntBASIC16.8■□□□□ 0.28
Mrpl40Q9Z2Q5 Gm18101-201ENSMUST00000215769 548 ntBASIC16.8■□□□□ 0.28
Mrpl40Q9Z2Q5 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Mrpl40Q9Z2Q5 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mrpl40Q9Z2Q5 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mrpl40Q9Z2Q5 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Mrpl40Q9Z2Q5 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mrpl40Q9Z2Q5 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mrpl40Q9Z2Q5 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Mrpl40Q9Z2Q5 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mrpl40Q9Z2Q5 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Mrpl40Q9Z2Q5 Dancr-204ENSMUST00000132389 2347 ntBASIC16.79■□□□□ 0.28
Mrpl40Q9Z2Q5 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mrpl40Q9Z2Q5 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Mrpl40Q9Z2Q5 Gm24841-201ENSMUST00000158676 357 ntBASIC16.79■□□□□ 0.28
Mrpl40Q9Z2Q5 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mrpl40Q9Z2Q5 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Mrpl40Q9Z2Q5 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mrpl40Q9Z2Q5 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mrpl40Q9Z2Q5 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Mrpl40Q9Z2Q5 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mrpl40Q9Z2Q5 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mrpl40Q9Z2Q5 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.79■□□□□ 0.28
Mrpl40Q9Z2Q5 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Mrpl40Q9Z2Q5 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mrpl40Q9Z2Q5 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mrpl40Q9Z2Q5 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mrpl40Q9Z2Q5 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Mrpl40Q9Z2Q5 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mrpl40Q9Z2Q5 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mrpl40Q9Z2Q5 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mrpl40Q9Z2Q5 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Mrpl40Q9Z2Q5 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Mrpl40Q9Z2Q5 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.78■□□□□ 0.28
Mrpl40Q9Z2Q5 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mrpl40Q9Z2Q5 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mrpl40Q9Z2Q5 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mrpl40Q9Z2Q5 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mrpl40Q9Z2Q5 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Mrpl40Q9Z2Q5 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Mrpl40Q9Z2Q5 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Mrpl40Q9Z2Q5 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Mrpl40Q9Z2Q5 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Mrpl40Q9Z2Q5 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
Mrpl40Q9Z2Q5 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mrpl40Q9Z2Q5 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mrpl40Q9Z2Q5 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mrpl40Q9Z2Q5 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mrpl40Q9Z2Q5 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Mrpl40Q9Z2Q5 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Mrpl40Q9Z2Q5 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mrpl40Q9Z2Q5 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mrpl40Q9Z2Q5 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Mrpl40Q9Z2Q5 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mrpl40Q9Z2Q5 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Mrpl40Q9Z2Q5 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Mrpl40Q9Z2Q5 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.77■□□□□ 0.28
Mrpl40Q9Z2Q5 Gm7791-201ENSMUST00000219066 539 ntBASIC16.77■□□□□ 0.28
Mrpl40Q9Z2Q5 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mrpl40Q9Z2Q5 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mrpl40Q9Z2Q5 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Mrpl40Q9Z2Q5 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Mrpl40Q9Z2Q5 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Mrpl40Q9Z2Q5 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Mrpl40Q9Z2Q5 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Mrpl40Q9Z2Q5 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Mrpl40Q9Z2Q5 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Mrpl40Q9Z2Q5 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mrpl40Q9Z2Q5 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mrpl40Q9Z2Q5 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms