Protein–RNA interactions for Protein: Q9WTN0

Ggps1, Geranylgeranyl pyrophosphate synthase, mousemouse

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ggps1Q9WTN0 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.61■□□□□ 0.57
Ggps1Q9WTN0 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ggps1Q9WTN0 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ggps1Q9WTN0 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
Ggps1Q9WTN0 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Ggps1Q9WTN0 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ggps1Q9WTN0 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ggps1Q9WTN0 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC18.61■□□□□ 0.57
Ggps1Q9WTN0 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Ggps1Q9WTN0 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.61■□□□□ 0.57
Ggps1Q9WTN0 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC18.61■□□□□ 0.57
Ggps1Q9WTN0 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC18.61■□□□□ 0.57
Ggps1Q9WTN0 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ggps1Q9WTN0 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC18.61■□□□□ 0.57
Ggps1Q9WTN0 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ggps1Q9WTN0 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.61■□□□□ 0.57
Ggps1Q9WTN0 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ggps1Q9WTN0 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ggps1Q9WTN0 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Ggps1Q9WTN0 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Ggps1Q9WTN0 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.6■□□□□ 0.57
Ggps1Q9WTN0 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ggps1Q9WTN0 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ggps1Q9WTN0 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Ggps1Q9WTN0 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Ggps1Q9WTN0 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ggps1Q9WTN0 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
Ggps1Q9WTN0 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ggps1Q9WTN0 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC18.6■□□□□ 0.57
Ggps1Q9WTN0 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ggps1Q9WTN0 AC153889.1-201ENSMUST00000219257 330 ntBASIC18.6■□□□□ 0.57
Ggps1Q9WTN0 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.6■□□□□ 0.57
Ggps1Q9WTN0 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.6■□□□□ 0.57
Ggps1Q9WTN0 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ggps1Q9WTN0 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Ggps1Q9WTN0 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Ggps1Q9WTN0 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ggps1Q9WTN0 Zfp264-201ENSMUST00000208656 1563 ntBASIC18.59■□□□□ 0.57
Ggps1Q9WTN0 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ggps1Q9WTN0 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
Ggps1Q9WTN0 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Ggps1Q9WTN0 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.59■□□□□ 0.57
Ggps1Q9WTN0 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ggps1Q9WTN0 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ggps1Q9WTN0 Gm27459-201ENSMUST00000184860 107 ntBASIC18.59■□□□□ 0.57
Ggps1Q9WTN0 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Ggps1Q9WTN0 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC18.59■□□□□ 0.57
Ggps1Q9WTN0 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ggps1Q9WTN0 Mzt1-203ENSMUST00000227948 952 ntBASIC18.59■□□□□ 0.57
Ggps1Q9WTN0 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ggps1Q9WTN0 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ggps1Q9WTN0 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ggps1Q9WTN0 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ggps1Q9WTN0 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ggps1Q9WTN0 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ggps1Q9WTN0 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Ggps1Q9WTN0 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ggps1Q9WTN0 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Ggps1Q9WTN0 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Ggps1Q9WTN0 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ggps1Q9WTN0 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ggps1Q9WTN0 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ggps1Q9WTN0 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ggps1Q9WTN0 Gm43347-201ENSMUST00000200226 580 ntBASIC18.58■□□□□ 0.56
Ggps1Q9WTN0 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ggps1Q9WTN0 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.58■□□□□ 0.56
Ggps1Q9WTN0 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.58■□□□□ 0.56
Ggps1Q9WTN0 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Ggps1Q9WTN0 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ggps1Q9WTN0 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Ggps1Q9WTN0 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.57■□□□□ 0.56
Ggps1Q9WTN0 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC18.57■□□□□ 0.56
Ggps1Q9WTN0 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.57■□□□□ 0.56
Ggps1Q9WTN0 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ggps1Q9WTN0 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC18.57■□□□□ 0.56
Ggps1Q9WTN0 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ggps1Q9WTN0 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.57■□□□□ 0.56
Ggps1Q9WTN0 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ggps1Q9WTN0 Gm44771-201ENSMUST00000206975 626 ntBASIC18.57■□□□□ 0.56
Ggps1Q9WTN0 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC18.57■□□□□ 0.56
Ggps1Q9WTN0 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ggps1Q9WTN0 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ggps1Q9WTN0 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ggps1Q9WTN0 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ggps1Q9WTN0 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ggps1Q9WTN0 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ggps1Q9WTN0 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ggps1Q9WTN0 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ggps1Q9WTN0 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Ggps1Q9WTN0 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ggps1Q9WTN0 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ggps1Q9WTN0 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ggps1Q9WTN0 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
Ggps1Q9WTN0 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ggps1Q9WTN0 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ggps1Q9WTN0 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ggps1Q9WTN0 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC18.56■□□□□ 0.56
Ggps1Q9WTN0 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC18.56■□□□□ 0.56
Ggps1Q9WTN0 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ggps1Q9WTN0 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms