Protein–RNA interactions for Protein: Q9R1A8

Rfwd2, E3 ubiquitin-protein ligase RFWD2, mousemouse

Known RBP Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd2Q9R1A8 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfwd2Q9R1A8 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfwd2Q9R1A8 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfwd2Q9R1A8 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfwd2Q9R1A8 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Rfwd2Q9R1A8 Gm10138-203ENSMUST00000206952 366 ntBASIC17.34■□□□□ 0.37
Rfwd2Q9R1A8 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfwd2Q9R1A8 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfwd2Q9R1A8 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfwd2Q9R1A8 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfwd2Q9R1A8 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rfwd2Q9R1A8 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rfwd2Q9R1A8 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rfwd2Q9R1A8 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rfwd2Q9R1A8 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rfwd2Q9R1A8 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rfwd2Q9R1A8 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Rfwd2Q9R1A8 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Rfwd2Q9R1A8 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rfwd2Q9R1A8 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Rfwd2Q9R1A8 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rfwd2Q9R1A8 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfwd2Q9R1A8 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rfwd2Q9R1A8 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfwd2Q9R1A8 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.33■□□□□ 0.36
Rfwd2Q9R1A8 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rfwd2Q9R1A8 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfwd2Q9R1A8 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfwd2Q9R1A8 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Rfwd2Q9R1A8 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfwd2Q9R1A8 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfwd2Q9R1A8 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfwd2Q9R1A8 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.32■□□□□ 0.36
Rfwd2Q9R1A8 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.32■□□□□ 0.36
Rfwd2Q9R1A8 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Rfwd2Q9R1A8 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfwd2Q9R1A8 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfwd2Q9R1A8 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfwd2Q9R1A8 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfwd2Q9R1A8 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.32■□□□□ 0.36
Rfwd2Q9R1A8 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.32■□□□□ 0.36
Rfwd2Q9R1A8 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfwd2Q9R1A8 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfwd2Q9R1A8 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rfwd2Q9R1A8 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfwd2Q9R1A8 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfwd2Q9R1A8 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfwd2Q9R1A8 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rfwd2Q9R1A8 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfwd2Q9R1A8 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfwd2Q9R1A8 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfwd2Q9R1A8 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfwd2Q9R1A8 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfwd2Q9R1A8 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Rfwd2Q9R1A8 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfwd2Q9R1A8 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfwd2Q9R1A8 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
Rfwd2Q9R1A8 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfwd2Q9R1A8 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfwd2Q9R1A8 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.31■□□□□ 0.36
Rfwd2Q9R1A8 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfwd2Q9R1A8 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfwd2Q9R1A8 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Rfwd2Q9R1A8 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rfwd2Q9R1A8 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfwd2Q9R1A8 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfwd2Q9R1A8 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.31■□□□□ 0.36
Rfwd2Q9R1A8 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfwd2Q9R1A8 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rfwd2Q9R1A8 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Rfwd2Q9R1A8 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Rfwd2Q9R1A8 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfwd2Q9R1A8 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
Rfwd2Q9R1A8 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfwd2Q9R1A8 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfwd2Q9R1A8 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfwd2Q9R1A8 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfwd2Q9R1A8 Gm15375-201ENSMUST00000119510 849 ntBASIC17.3■□□□□ 0.36
Rfwd2Q9R1A8 Mir6349-201ENSMUST00000184059 97 ntBASIC17.3■□□□□ 0.36
Rfwd2Q9R1A8 Gm37856-201ENSMUST00000191634 999 ntBASIC17.3■□□□□ 0.36
Rfwd2Q9R1A8 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.3■□□□□ 0.36
Rfwd2Q9R1A8 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.3■□□□□ 0.36
Rfwd2Q9R1A8 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Rfwd2Q9R1A8 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfwd2Q9R1A8 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfwd2Q9R1A8 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.3■□□□□ 0.36
Rfwd2Q9R1A8 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfwd2Q9R1A8 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rfwd2Q9R1A8 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfwd2Q9R1A8 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfwd2Q9R1A8 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.29■□□□□ 0.36
Rfwd2Q9R1A8 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfwd2Q9R1A8 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Rfwd2Q9R1A8 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfwd2Q9R1A8 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfwd2Q9R1A8 Gm13158-201ENSMUST00000122007 736 ntBASIC17.29■□□□□ 0.36
Rfwd2Q9R1A8 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Rfwd2Q9R1A8 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfwd2Q9R1A8 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfwd2Q9R1A8 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms