Protein–RNA interactions for Protein: Q9QZ28

Six6, Homeobox protein SIX6, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six6Q9QZ28 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Six6Q9QZ28 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Six6Q9QZ28 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Six6Q9QZ28 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Six6Q9QZ28 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Six6Q9QZ28 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Six6Q9QZ28 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Six6Q9QZ28 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Six6Q9QZ28 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.33□□□□□ -0.12
Six6Q9QZ28 Gm14117-201ENSMUST00000122417 843 ntBASIC14.33□□□□□ -0.12
Six6Q9QZ28 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Six6Q9QZ28 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Six6Q9QZ28 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Six6Q9QZ28 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Six6Q9QZ28 Gm37820-201ENSMUST00000194021 2147 ntBASIC14.33□□□□□ -0.12
Six6Q9QZ28 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Six6Q9QZ28 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Six6Q9QZ28 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Six6Q9QZ28 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Six6Q9QZ28 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Six6Q9QZ28 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Six6Q9QZ28 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Six6Q9QZ28 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Six6Q9QZ28 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Six6Q9QZ28 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Six6Q9QZ28 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Six6Q9QZ28 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Six6Q9QZ28 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC14.32□□□□□ -0.12
Six6Q9QZ28 Mir7075-201ENSMUST00000184187 82 ntBASIC14.32□□□□□ -0.12
Six6Q9QZ28 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Six6Q9QZ28 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Six6Q9QZ28 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.32□□□□□ -0.12
Six6Q9QZ28 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Six6Q9QZ28 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Six6Q9QZ28 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Six6Q9QZ28 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.32□□□□□ -0.12
Six6Q9QZ28 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Six6Q9QZ28 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Six6Q9QZ28 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14.31□□□□□ -0.12
Six6Q9QZ28 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Six6Q9QZ28 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.31□□□□□ -0.12
Six6Q9QZ28 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Six6Q9QZ28 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Six6Q9QZ28 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Six6Q9QZ28 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Six6Q9QZ28 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Six6Q9QZ28 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Six6Q9QZ28 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Six6Q9QZ28 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Six6Q9QZ28 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Six6Q9QZ28 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Six6Q9QZ28 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Six6Q9QZ28 Gm43173-201ENSMUST00000202246 593 ntBASIC14.31□□□□□ -0.12
Six6Q9QZ28 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Six6Q9QZ28 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Six6Q9QZ28 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC14.31□□□□□ -0.12
Six6Q9QZ28 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Six6Q9QZ28 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Six6Q9QZ28 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Six6Q9QZ28 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Six6Q9QZ28 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Six6Q9QZ28 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Six6Q9QZ28 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Six6Q9QZ28 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Six6Q9QZ28 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Six6Q9QZ28 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Six6Q9QZ28 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Six6Q9QZ28 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Six6Q9QZ28 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Six6Q9QZ28 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Six6Q9QZ28 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Six6Q9QZ28 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Six6Q9QZ28 Wdr70-203ENSMUST00000227371 1130 ntBASIC14.3□□□□□ -0.12
Six6Q9QZ28 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Six6Q9QZ28 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Six6Q9QZ28 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Six6Q9QZ28 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Six6Q9QZ28 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Six6Q9QZ28 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Six6Q9QZ28 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Six6Q9QZ28 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Six6Q9QZ28 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Six6Q9QZ28 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.3□□□□□ -0.12
Six6Q9QZ28 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Six6Q9QZ28 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC14.3□□□□□ -0.12
Six6Q9QZ28 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Six6Q9QZ28 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Six6Q9QZ28 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Six6Q9QZ28 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Six6Q9QZ28 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Six6Q9QZ28 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Six6Q9QZ28 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Six6Q9QZ28 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Six6Q9QZ28 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Six6Q9QZ28 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Six6Q9QZ28 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Six6Q9QZ28 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Six6Q9QZ28 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Six6Q9QZ28 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Six6Q9QZ28 Gm13534-201ENSMUST00000121169 513 ntBASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms