Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shroom3Q9QXN0 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shroom3Q9QXN0 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Shroom3Q9QXN0 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Shroom3Q9QXN0 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Shroom3Q9QXN0 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Shroom3Q9QXN0 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shroom3Q9QXN0 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.82■□□□□ 0.28
Shroom3Q9QXN0 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shroom3Q9QXN0 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shroom3Q9QXN0 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Shroom3Q9QXN0 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shroom3Q9QXN0 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shroom3Q9QXN0 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.81■□□□□ 0.28
Shroom3Q9QXN0 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shroom3Q9QXN0 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Shroom3Q9QXN0 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shroom3Q9QXN0 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shroom3Q9QXN0 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.81■□□□□ 0.28
Shroom3Q9QXN0 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shroom3Q9QXN0 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shroom3Q9QXN0 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shroom3Q9QXN0 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shroom3Q9QXN0 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shroom3Q9QXN0 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shroom3Q9QXN0 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Shroom3Q9QXN0 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shroom3Q9QXN0 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shroom3Q9QXN0 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shroom3Q9QXN0 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shroom3Q9QXN0 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shroom3Q9QXN0 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shroom3Q9QXN0 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shroom3Q9QXN0 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Shroom3Q9QXN0 Gm25016-201ENSMUST00000158399 131 ntBASIC16.8■□□□□ 0.28
Shroom3Q9QXN0 Gm17807-201ENSMUST00000186869 298 ntBASIC16.8■□□□□ 0.28
Shroom3Q9QXN0 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.8■□□□□ 0.28
Shroom3Q9QXN0 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shroom3Q9QXN0 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Shroom3Q9QXN0 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Shroom3Q9QXN0 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Shroom3Q9QXN0 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shroom3Q9QXN0 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Shroom3Q9QXN0 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shroom3Q9QXN0 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Shroom3Q9QXN0 Actl10-202ENSMUST00000226583 1501 ntBASIC16.8■□□□□ 0.28
Shroom3Q9QXN0 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Shroom3Q9QXN0 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shroom3Q9QXN0 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shroom3Q9QXN0 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Shroom3Q9QXN0 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shroom3Q9QXN0 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.8■□□□□ 0.28
Shroom3Q9QXN0 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Shroom3Q9QXN0 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.8■□□□□ 0.28
Shroom3Q9QXN0 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Shroom3Q9QXN0 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Shroom3Q9QXN0 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shroom3Q9QXN0 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shroom3Q9QXN0 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Shroom3Q9QXN0 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Shroom3Q9QXN0 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shroom3Q9QXN0 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shroom3Q9QXN0 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shroom3Q9QXN0 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shroom3Q9QXN0 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.79■□□□□ 0.28
Shroom3Q9QXN0 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shroom3Q9QXN0 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shroom3Q9QXN0 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shroom3Q9QXN0 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Shroom3Q9QXN0 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Shroom3Q9QXN0 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Shroom3Q9QXN0 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shroom3Q9QXN0 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.79■□□□□ 0.28
Shroom3Q9QXN0 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shroom3Q9QXN0 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Shroom3Q9QXN0 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.79■□□□□ 0.28
Shroom3Q9QXN0 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shroom3Q9QXN0 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shroom3Q9QXN0 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shroom3Q9QXN0 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shroom3Q9QXN0 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shroom3Q9QXN0 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Shroom3Q9QXN0 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shroom3Q9QXN0 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Shroom3Q9QXN0 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.79■□□□□ 0.28
Shroom3Q9QXN0 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shroom3Q9QXN0 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.79■□□□□ 0.28
Shroom3Q9QXN0 Gm13216-201ENSMUST00000117145 591 ntBASIC16.78■□□□□ 0.28
Shroom3Q9QXN0 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shroom3Q9QXN0 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Shroom3Q9QXN0 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Shroom3Q9QXN0 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shroom3Q9QXN0 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Shroom3Q9QXN0 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.78■□□□□ 0.28
Shroom3Q9QXN0 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shroom3Q9QXN0 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shroom3Q9QXN0 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shroom3Q9QXN0 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Shroom3Q9QXN0 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shroom3Q9QXN0 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms