Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Msh5Q9QUM7 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.17■□□□□ 0.34
Msh5Q9QUM7 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Msh5Q9QUM7 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Msh5Q9QUM7 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Msh5Q9QUM7 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
Msh5Q9QUM7 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Msh5Q9QUM7 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Msh5Q9QUM7 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Msh5Q9QUM7 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Msh5Q9QUM7 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Msh5Q9QUM7 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.16■□□□□ 0.34
Msh5Q9QUM7 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Msh5Q9QUM7 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Msh5Q9QUM7 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Msh5Q9QUM7 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Msh5Q9QUM7 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Msh5Q9QUM7 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Msh5Q9QUM7 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Msh5Q9QUM7 Gm22993-201ENSMUST00000175423 254 ntBASIC17.16■□□□□ 0.34
Msh5Q9QUM7 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Msh5Q9QUM7 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.16■□□□□ 0.34
Msh5Q9QUM7 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
Msh5Q9QUM7 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Msh5Q9QUM7 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Msh5Q9QUM7 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Msh5Q9QUM7 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Msh5Q9QUM7 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.16■□□□□ 0.34
Msh5Q9QUM7 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Msh5Q9QUM7 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.15■□□□□ 0.34
Msh5Q9QUM7 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Msh5Q9QUM7 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Msh5Q9QUM7 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Msh5Q9QUM7 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Msh5Q9QUM7 Mir1199-201ENSMUST00000117015 119 ntBASIC17.15■□□□□ 0.34
Msh5Q9QUM7 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.15■□□□□ 0.34
Msh5Q9QUM7 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Msh5Q9QUM7 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Msh5Q9QUM7 Gm10517-202ENSMUST00000192970 758 ntBASIC17.15■□□□□ 0.34
Msh5Q9QUM7 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Msh5Q9QUM7 Gm44953-201ENSMUST00000208745 1286 ntBASIC17.15■□□□□ 0.34
Msh5Q9QUM7 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Msh5Q9QUM7 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Msh5Q9QUM7 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Msh5Q9QUM7 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Msh5Q9QUM7 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Msh5Q9QUM7 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Msh5Q9QUM7 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Msh5Q9QUM7 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Msh5Q9QUM7 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Msh5Q9QUM7 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Msh5Q9QUM7 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Msh5Q9QUM7 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Msh5Q9QUM7 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Msh5Q9QUM7 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC17.14■□□□□ 0.33
Msh5Q9QUM7 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Msh5Q9QUM7 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.14■□□□□ 0.33
Msh5Q9QUM7 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.14■□□□□ 0.33
Msh5Q9QUM7 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.14■□□□□ 0.33
Msh5Q9QUM7 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Msh5Q9QUM7 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Msh5Q9QUM7 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Msh5Q9QUM7 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Msh5Q9QUM7 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Msh5Q9QUM7 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.14■□□□□ 0.33
Msh5Q9QUM7 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Msh5Q9QUM7 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Msh5Q9QUM7 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.13■□□□□ 0.33
Msh5Q9QUM7 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Msh5Q9QUM7 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Msh5Q9QUM7 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Msh5Q9QUM7 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Msh5Q9QUM7 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.13■□□□□ 0.33
Msh5Q9QUM7 Gm20825-201ENSMUST00000178149 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Msh5Q9QUM7 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Msh5Q9QUM7 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.13■□□□□ 0.33
Msh5Q9QUM7 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Msh5Q9QUM7 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.13■□□□□ 0.33
Msh5Q9QUM7 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Msh5Q9QUM7 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Msh5Q9QUM7 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Msh5Q9QUM7 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Msh5Q9QUM7 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Msh5Q9QUM7 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Msh5Q9QUM7 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.13■□□□□ 0.33
Msh5Q9QUM7 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Msh5Q9QUM7 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Msh5Q9QUM7 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Msh5Q9QUM7 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Msh5Q9QUM7 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Msh5Q9QUM7 Gm37744-201ENSMUST00000194616 1590 ntBASIC17.12■□□□□ 0.33
Msh5Q9QUM7 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.12■□□□□ 0.33
Msh5Q9QUM7 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.12■□□□□ 0.33
Msh5Q9QUM7 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Msh5Q9QUM7 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Msh5Q9QUM7 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Msh5Q9QUM7 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Msh5Q9QUM7 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.12■□□□□ 0.33
Msh5Q9QUM7 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Msh5Q9QUM7 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms