Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sec61a2Q9JLR1 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.16■□□□□ 0.02
Sec61a2Q9JLR1 Gm24841-201ENSMUST00000158676 357 ntBASIC15.16■□□□□ 0.02
Sec61a2Q9JLR1 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sec61a2Q9JLR1 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sec61a2Q9JLR1 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sec61a2Q9JLR1 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC15.16■□□□□ 0.02
Sec61a2Q9JLR1 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sec61a2Q9JLR1 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sec61a2Q9JLR1 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sec61a2Q9JLR1 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sec61a2Q9JLR1 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sec61a2Q9JLR1 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.16■□□□□ 0.02
Sec61a2Q9JLR1 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.16■□□□□ 0.02
Sec61a2Q9JLR1 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sec61a2Q9JLR1 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.16■□□□□ 0.02
Sec61a2Q9JLR1 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sec61a2Q9JLR1 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.15■□□□□ 0.02
Sec61a2Q9JLR1 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sec61a2Q9JLR1 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.15■□□□□ 0.02
Sec61a2Q9JLR1 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.15■□□□□ 0.02
Sec61a2Q9JLR1 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC15.15■□□□□ 0.02
Sec61a2Q9JLR1 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sec61a2Q9JLR1 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sec61a2Q9JLR1 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sec61a2Q9JLR1 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sec61a2Q9JLR1 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sec61a2Q9JLR1 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sec61a2Q9JLR1 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Sec61a2Q9JLR1 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sec61a2Q9JLR1 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sec61a2Q9JLR1 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sec61a2Q9JLR1 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sec61a2Q9JLR1 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.14■□□□□ 0.01
Sec61a2Q9JLR1 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sec61a2Q9JLR1 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sec61a2Q9JLR1 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sec61a2Q9JLR1 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sec61a2Q9JLR1 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sec61a2Q9JLR1 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sec61a2Q9JLR1 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Sec61a2Q9JLR1 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sec61a2Q9JLR1 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sec61a2Q9JLR1 Otx2os1-204ENSMUST00000227221 751 ntBASIC15.14■□□□□ 0.01
Sec61a2Q9JLR1 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.14■□□□□ 0.01
Sec61a2Q9JLR1 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC15.14■□□□□ 0.01
Sec61a2Q9JLR1 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sec61a2Q9JLR1 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sec61a2Q9JLR1 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sec61a2Q9JLR1 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sec61a2Q9JLR1 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sec61a2Q9JLR1 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sec61a2Q9JLR1 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.13■□□□□ 0.01
Sec61a2Q9JLR1 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sec61a2Q9JLR1 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sec61a2Q9JLR1 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sec61a2Q9JLR1 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sec61a2Q9JLR1 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.13■□□□□ 0.01
Sec61a2Q9JLR1 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sec61a2Q9JLR1 Gm12085-201ENSMUST00000119263 940 ntBASIC15.13■□□□□ 0.01
Sec61a2Q9JLR1 Gm20472-201ENSMUST00000174403 1240 ntBASIC15.13■□□□□ 0.01
Sec61a2Q9JLR1 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC15.13■□□□□ 0.01
Sec61a2Q9JLR1 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Sec61a2Q9JLR1 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sec61a2Q9JLR1 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sec61a2Q9JLR1 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sec61a2Q9JLR1 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sec61a2Q9JLR1 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
Sec61a2Q9JLR1 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Sec61a2Q9JLR1 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sec61a2Q9JLR1 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Sec61a2Q9JLR1 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sec61a2Q9JLR1 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sec61a2Q9JLR1 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sec61a2Q9JLR1 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sec61a2Q9JLR1 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sec61a2Q9JLR1 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sec61a2Q9JLR1 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.12■□□□□ 0.01
Sec61a2Q9JLR1 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sec61a2Q9JLR1 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sec61a2Q9JLR1 Gm5417-201ENSMUST00000079706 384 ntBASIC15.12■□□□□ 0.01
Sec61a2Q9JLR1 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sec61a2Q9JLR1 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sec61a2Q9JLR1 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sec61a2Q9JLR1 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sec61a2Q9JLR1 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sec61a2Q9JLR1 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sec61a2Q9JLR1 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sec61a2Q9JLR1 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Sec61a2Q9JLR1 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.11■□□□□ 0.01
Sec61a2Q9JLR1 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Sec61a2Q9JLR1 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sec61a2Q9JLR1 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sec61a2Q9JLR1 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sec61a2Q9JLR1 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sec61a2Q9JLR1 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sec61a2Q9JLR1 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sec61a2Q9JLR1 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sec61a2Q9JLR1 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sec61a2Q9JLR1 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms