Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps35Q9EQH3 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps35Q9EQH3 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Vps35Q9EQH3 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Vps35Q9EQH3 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.84■□□□□ 0.29
Vps35Q9EQH3 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Vps35Q9EQH3 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Vps35Q9EQH3 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps35Q9EQH3 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps35Q9EQH3 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps35Q9EQH3 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Vps35Q9EQH3 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Vps35Q9EQH3 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Vps35Q9EQH3 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Vps35Q9EQH3 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Vps35Q9EQH3 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Vps35Q9EQH3 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Vps35Q9EQH3 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Vps35Q9EQH3 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
Vps35Q9EQH3 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Vps35Q9EQH3 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Vps35Q9EQH3 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Vps35Q9EQH3 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.83■□□□□ 0.28
Vps35Q9EQH3 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps35Q9EQH3 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps35Q9EQH3 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Vps35Q9EQH3 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Vps35Q9EQH3 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Vps35Q9EQH3 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Vps35Q9EQH3 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.83■□□□□ 0.28
Vps35Q9EQH3 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps35Q9EQH3 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Vps35Q9EQH3 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Vps35Q9EQH3 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps35Q9EQH3 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.83■□□□□ 0.28
Vps35Q9EQH3 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Vps35Q9EQH3 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps35Q9EQH3 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps35Q9EQH3 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.83■□□□□ 0.28
Vps35Q9EQH3 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps35Q9EQH3 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.82■□□□□ 0.28
Vps35Q9EQH3 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps35Q9EQH3 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps35Q9EQH3 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps35Q9EQH3 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Vps35Q9EQH3 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.82■□□□□ 0.28
Vps35Q9EQH3 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Vps35Q9EQH3 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps35Q9EQH3 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.82■□□□□ 0.28
Vps35Q9EQH3 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps35Q9EQH3 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vps35Q9EQH3 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps35Q9EQH3 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Vps35Q9EQH3 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps35Q9EQH3 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps35Q9EQH3 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.82■□□□□ 0.28
Vps35Q9EQH3 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.81■□□□□ 0.28
Vps35Q9EQH3 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Vps35Q9EQH3 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps35Q9EQH3 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Vps35Q9EQH3 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Vps35Q9EQH3 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps35Q9EQH3 Gm16061-201ENSMUST00000122167 857 ntBASIC16.81■□□□□ 0.28
Vps35Q9EQH3 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Vps35Q9EQH3 Gm18959-201ENSMUST00000208954 655 ntBASIC16.81■□□□□ 0.28
Vps35Q9EQH3 Gm9987-201ENSMUST00000069768 567 ntBASIC16.81■□□□□ 0.28
Vps35Q9EQH3 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps35Q9EQH3 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps35Q9EQH3 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps35Q9EQH3 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps35Q9EQH3 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps35Q9EQH3 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Vps35Q9EQH3 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Vps35Q9EQH3 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps35Q9EQH3 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps35Q9EQH3 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps35Q9EQH3 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps35Q9EQH3 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.8■□□□□ 0.28
Vps35Q9EQH3 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Vps35Q9EQH3 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Vps35Q9EQH3 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Vps35Q9EQH3 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.8■□□□□ 0.28
Vps35Q9EQH3 Gm13474-201ENSMUST00000122466 815 ntBASIC16.8■□□□□ 0.28
Vps35Q9EQH3 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Vps35Q9EQH3 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Vps35Q9EQH3 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Vps35Q9EQH3 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Vps35Q9EQH3 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Vps35Q9EQH3 Gm45058-201ENSMUST00000205810 766 ntBASIC16.8■□□□□ 0.28
Vps35Q9EQH3 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps35Q9EQH3 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps35Q9EQH3 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.8■□□□□ 0.28
Vps35Q9EQH3 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Vps35Q9EQH3 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps35Q9EQH3 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.8■□□□□ 0.28
Vps35Q9EQH3 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps35Q9EQH3 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps35Q9EQH3 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps35Q9EQH3 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps35Q9EQH3 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms