Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Col4a3bpQ9EQG9 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col4a3bpQ9EQG9 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col4a3bpQ9EQG9 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col4a3bpQ9EQG9 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Col4a3bpQ9EQG9 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col4a3bpQ9EQG9 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col4a3bpQ9EQG9 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col4a3bpQ9EQG9 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col4a3bpQ9EQG9 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Col4a3bpQ9EQG9 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC19.27■□□□□ 0.68
Col4a3bpQ9EQG9 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Col4a3bpQ9EQG9 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.27■□□□□ 0.68
Col4a3bpQ9EQG9 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Col4a3bpQ9EQG9 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col4a3bpQ9EQG9 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Col4a3bpQ9EQG9 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Col4a3bpQ9EQG9 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Col4a3bpQ9EQG9 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Col4a3bpQ9EQG9 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC19.26■□□□□ 0.67
Col4a3bpQ9EQG9 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col4a3bpQ9EQG9 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col4a3bpQ9EQG9 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Col4a3bpQ9EQG9 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col4a3bpQ9EQG9 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col4a3bpQ9EQG9 Gm12085-201ENSMUST00000119263 940 ntBASIC19.26■□□□□ 0.67
Col4a3bpQ9EQG9 Gm13836-201ENSMUST00000121159 501 ntBASIC19.26■□□□□ 0.67
Col4a3bpQ9EQG9 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Col4a3bpQ9EQG9 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Col4a3bpQ9EQG9 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Col4a3bpQ9EQG9 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Col4a3bpQ9EQG9 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Col4a3bpQ9EQG9 Gm43799-201ENSMUST00000201845 579 ntBASIC19.26■□□□□ 0.67
Col4a3bpQ9EQG9 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Col4a3bpQ9EQG9 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col4a3bpQ9EQG9 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col4a3bpQ9EQG9 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC19.26■□□□□ 0.67
Col4a3bpQ9EQG9 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col4a3bpQ9EQG9 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col4a3bpQ9EQG9 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col4a3bpQ9EQG9 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Col4a3bpQ9EQG9 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col4a3bpQ9EQG9 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col4a3bpQ9EQG9 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col4a3bpQ9EQG9 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col4a3bpQ9EQG9 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col4a3bpQ9EQG9 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col4a3bpQ9EQG9 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col4a3bpQ9EQG9 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Col4a3bpQ9EQG9 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.25■□□□□ 0.67
Col4a3bpQ9EQG9 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19.25■□□□□ 0.67
Col4a3bpQ9EQG9 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.25■□□□□ 0.67
Col4a3bpQ9EQG9 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.25■□□□□ 0.67
Col4a3bpQ9EQG9 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col4a3bpQ9EQG9 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col4a3bpQ9EQG9 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col4a3bpQ9EQG9 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col4a3bpQ9EQG9 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col4a3bpQ9EQG9 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Col4a3bpQ9EQG9 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col4a3bpQ9EQG9 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Col4a3bpQ9EQG9 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.25■□□□□ 0.67
Col4a3bpQ9EQG9 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col4a3bpQ9EQG9 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col4a3bpQ9EQG9 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col4a3bpQ9EQG9 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col4a3bpQ9EQG9 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col4a3bpQ9EQG9 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col4a3bpQ9EQG9 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col4a3bpQ9EQG9 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col4a3bpQ9EQG9 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Col4a3bpQ9EQG9 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Col4a3bpQ9EQG9 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Col4a3bpQ9EQG9 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Col4a3bpQ9EQG9 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Col4a3bpQ9EQG9 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Col4a3bpQ9EQG9 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Col4a3bpQ9EQG9 Gm9731-201ENSMUST00000209480 747 ntBASIC19.24■□□□□ 0.67
Col4a3bpQ9EQG9 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.24■□□□□ 0.67
Col4a3bpQ9EQG9 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col4a3bpQ9EQG9 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col4a3bpQ9EQG9 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col4a3bpQ9EQG9 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col4a3bpQ9EQG9 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col4a3bpQ9EQG9 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col4a3bpQ9EQG9 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Col4a3bpQ9EQG9 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.24■□□□□ 0.67
Col4a3bpQ9EQG9 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Col4a3bpQ9EQG9 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col4a3bpQ9EQG9 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col4a3bpQ9EQG9 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col4a3bpQ9EQG9 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Col4a3bpQ9EQG9 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col4a3bpQ9EQG9 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Col4a3bpQ9EQG9 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col4a3bpQ9EQG9 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col4a3bpQ9EQG9 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Col4a3bpQ9EQG9 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Col4a3bpQ9EQG9 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Col4a3bpQ9EQG9 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms