Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC19.11■□□□□ 0.65
Upf1Q9EPU0 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Upf1Q9EPU0 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Upf1Q9EPU0 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Upf1Q9EPU0 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Upf1Q9EPU0 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Upf1Q9EPU0 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
Upf1Q9EPU0 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Upf1Q9EPU0 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Upf1Q9EPU0 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Upf1Q9EPU0 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Upf1Q9EPU0 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Upf1Q9EPU0 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.1■□□□□ 0.65
Upf1Q9EPU0 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Upf1Q9EPU0 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Upf1Q9EPU0 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC19.1■□□□□ 0.65
Upf1Q9EPU0 AC124732.2-201ENSMUST00000221977 316 ntBASIC19.1■□□□□ 0.65
Upf1Q9EPU0 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Upf1Q9EPU0 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Upf1Q9EPU0 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Upf1Q9EPU0 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Upf1Q9EPU0 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Upf1Q9EPU0 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.1■□□□□ 0.65
Upf1Q9EPU0 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Upf1Q9EPU0 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Upf1Q9EPU0 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Upf1Q9EPU0 Gm13365-201ENSMUST00000121188 973 ntBASIC19.09■□□□□ 0.65
Upf1Q9EPU0 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC19.09■□□□□ 0.65
Upf1Q9EPU0 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC19.09■□□□□ 0.65
Upf1Q9EPU0 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC19.09■□□□□ 0.65
Upf1Q9EPU0 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Upf1Q9EPU0 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC19.09■□□□□ 0.65
Upf1Q9EPU0 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
Upf1Q9EPU0 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Upf1Q9EPU0 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.09■□□□□ 0.65
Upf1Q9EPU0 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Upf1Q9EPU0 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.09■□□□□ 0.65
Upf1Q9EPU0 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Upf1Q9EPU0 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Upf1Q9EPU0 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Upf1Q9EPU0 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Upf1Q9EPU0 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Upf1Q9EPU0 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Upf1Q9EPU0 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Upf1Q9EPU0 Mir8112-201ENSMUST00000184382 131 ntBASIC19.08■□□□□ 0.64
Upf1Q9EPU0 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Upf1Q9EPU0 AC140397.2-201ENSMUST00000224213 834 ntBASIC19.08■□□□□ 0.64
Upf1Q9EPU0 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Upf1Q9EPU0 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Upf1Q9EPU0 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Upf1Q9EPU0 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Upf1Q9EPU0 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Upf1Q9EPU0 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Upf1Q9EPU0 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Upf1Q9EPU0 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Upf1Q9EPU0 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Upf1Q9EPU0 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Upf1Q9EPU0 Gm7507-201ENSMUST00000183053 1008 ntBASIC19.07■□□□□ 0.64
Upf1Q9EPU0 Gm27300-201ENSMUST00000184085 97 ntBASIC19.07■□□□□ 0.64
Upf1Q9EPU0 Gm27335-201ENSMUST00000184758 97 ntBASIC19.07■□□□□ 0.64
Upf1Q9EPU0 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC19.07■□□□□ 0.64
Upf1Q9EPU0 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Upf1Q9EPU0 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Upf1Q9EPU0 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Upf1Q9EPU0 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Upf1Q9EPU0 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
Upf1Q9EPU0 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Upf1Q9EPU0 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Upf1Q9EPU0 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC19.06■□□□□ 0.64
Upf1Q9EPU0 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Upf1Q9EPU0 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Upf1Q9EPU0 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.06■□□□□ 0.64
Upf1Q9EPU0 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Upf1Q9EPU0 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC19.06■□□□□ 0.64
Upf1Q9EPU0 Gm22175-201ENSMUST00000175007 78 ntBASIC19.06■□□□□ 0.64
Upf1Q9EPU0 Gm27622-201ENSMUST00000183779 60 ntBASIC19.06■□□□□ 0.64
Upf1Q9EPU0 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Upf1Q9EPU0 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Upf1Q9EPU0 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Upf1Q9EPU0 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Upf1Q9EPU0 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Upf1Q9EPU0 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Upf1Q9EPU0 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Upf1Q9EPU0 Gm13332-201ENSMUST00000120451 1398 ntBASIC19.06■□□□□ 0.64
Upf1Q9EPU0 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Upf1Q9EPU0 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Upf1Q9EPU0 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Upf1Q9EPU0 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Upf1Q9EPU0 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Upf1Q9EPU0 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Upf1Q9EPU0 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Upf1Q9EPU0 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Upf1Q9EPU0 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Upf1Q9EPU0 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Upf1Q9EPU0 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Upf1Q9EPU0 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC19.05■□□□□ 0.64
Upf1Q9EPU0 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
Upf1Q9EPU0 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Upf1Q9EPU0 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Upf1Q9EPU0 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms