Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Gm29707-201ENSMUST00000196325 491 ntBASIC16.44■□□□□ 0.22
Rrp8Q9DB85 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.44■□□□□ 0.22
Rrp8Q9DB85 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rrp8Q9DB85 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rrp8Q9DB85 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rrp8Q9DB85 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rrp8Q9DB85 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.44■□□□□ 0.22
Rrp8Q9DB85 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Rrp8Q9DB85 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Rrp8Q9DB85 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Rrp8Q9DB85 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rrp8Q9DB85 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rrp8Q9DB85 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rrp8Q9DB85 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.43■□□□□ 0.22
Rrp8Q9DB85 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rrp8Q9DB85 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rrp8Q9DB85 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rrp8Q9DB85 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rrp8Q9DB85 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rrp8Q9DB85 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
Rrp8Q9DB85 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.43■□□□□ 0.22
Rrp8Q9DB85 Gm12644-201ENSMUST00000119935 606 ntBASIC16.43■□□□□ 0.22
Rrp8Q9DB85 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.43■□□□□ 0.22
Rrp8Q9DB85 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rrp8Q9DB85 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rrp8Q9DB85 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rrp8Q9DB85 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rrp8Q9DB85 Gm5867-201ENSMUST00000063197 592 ntBASIC16.43■□□□□ 0.22
Rrp8Q9DB85 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Rrp8Q9DB85 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.43■□□□□ 0.22
Rrp8Q9DB85 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rrp8Q9DB85 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rrp8Q9DB85 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rrp8Q9DB85 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rrp8Q9DB85 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rrp8Q9DB85 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rrp8Q9DB85 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rrp8Q9DB85 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rrp8Q9DB85 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rrp8Q9DB85 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.42■□□□□ 0.22
Rrp8Q9DB85 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.42■□□□□ 0.22
Rrp8Q9DB85 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rrp8Q9DB85 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rrp8Q9DB85 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.42■□□□□ 0.22
Rrp8Q9DB85 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rrp8Q9DB85 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Rrp8Q9DB85 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rrp8Q9DB85 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.42■□□□□ 0.22
Rrp8Q9DB85 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.42■□□□□ 0.22
Rrp8Q9DB85 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rrp8Q9DB85 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rrp8Q9DB85 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rrp8Q9DB85 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rrp8Q9DB85 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rrp8Q9DB85 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rrp8Q9DB85 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rrp8Q9DB85 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rrp8Q9DB85 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rrp8Q9DB85 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Rrp8Q9DB85 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rrp8Q9DB85 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rrp8Q9DB85 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rrp8Q9DB85 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rrp8Q9DB85 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rrp8Q9DB85 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rrp8Q9DB85 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rrp8Q9DB85 Rprl3-201ENSMUST00000157400 290 ntBASIC16.41■□□□□ 0.22
Rrp8Q9DB85 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rrp8Q9DB85 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rrp8Q9DB85 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rrp8Q9DB85 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rrp8Q9DB85 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.41■□□□□ 0.22
Rrp8Q9DB85 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.41■□□□□ 0.22
Rrp8Q9DB85 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rrp8Q9DB85 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rrp8Q9DB85 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.41■□□□□ 0.22
Rrp8Q9DB85 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rrp8Q9DB85 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rrp8Q9DB85 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rrp8Q9DB85 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Rrp8Q9DB85 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rrp8Q9DB85 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rrp8Q9DB85 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rrp8Q9DB85 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.4■□□□□ 0.22
Rrp8Q9DB85 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.4■□□□□ 0.22
Rrp8Q9DB85 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Rrp8Q9DB85 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rrp8Q9DB85 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rrp8Q9DB85 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rrp8Q9DB85 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.4■□□□□ 0.22
Rrp8Q9DB85 Gm44450-201ENSMUST00000199528 114 ntBASIC16.4■□□□□ 0.22
Rrp8Q9DB85 Gm18421-201ENSMUST00000204122 625 ntBASIC16.4■□□□□ 0.22
Rrp8Q9DB85 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.4■□□□□ 0.22
Rrp8Q9DB85 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rrp8Q9DB85 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rrp8Q9DB85 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Rrp8Q9DB85 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rrp8Q9DB85 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rrp8Q9DB85 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rrp8Q9DB85 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms