Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vps33aQ9D2N9 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.88■□□□□ 0.45
Vps33aQ9D2N9 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vps33aQ9D2N9 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vps33aQ9D2N9 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vps33aQ9D2N9 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.88■□□□□ 0.45
Vps33aQ9D2N9 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Vps33aQ9D2N9 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Vps33aQ9D2N9 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vps33aQ9D2N9 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Vps33aQ9D2N9 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.88■□□□□ 0.45
Vps33aQ9D2N9 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vps33aQ9D2N9 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vps33aQ9D2N9 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vps33aQ9D2N9 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Vps33aQ9D2N9 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vps33aQ9D2N9 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Vps33aQ9D2N9 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vps33aQ9D2N9 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vps33aQ9D2N9 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vps33aQ9D2N9 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vps33aQ9D2N9 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps33aQ9D2N9 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps33aQ9D2N9 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps33aQ9D2N9 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps33aQ9D2N9 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
Vps33aQ9D2N9 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Vps33aQ9D2N9 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps33aQ9D2N9 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Vps33aQ9D2N9 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps33aQ9D2N9 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps33aQ9D2N9 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Vps33aQ9D2N9 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.87■□□□□ 0.45
Vps33aQ9D2N9 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Vps33aQ9D2N9 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Vps33aQ9D2N9 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps33aQ9D2N9 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Vps33aQ9D2N9 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Vps33aQ9D2N9 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Vps33aQ9D2N9 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps33aQ9D2N9 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Vps33aQ9D2N9 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps33aQ9D2N9 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps33aQ9D2N9 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps33aQ9D2N9 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps33aQ9D2N9 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps33aQ9D2N9 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.86■□□□□ 0.45
Vps33aQ9D2N9 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Vps33aQ9D2N9 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps33aQ9D2N9 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Vps33aQ9D2N9 Gm13401-201ENSMUST00000117074 291 ntBASIC17.86■□□□□ 0.45
Vps33aQ9D2N9 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.86■□□□□ 0.45
Vps33aQ9D2N9 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.86■□□□□ 0.45
Vps33aQ9D2N9 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps33aQ9D2N9 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps33aQ9D2N9 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Vps33aQ9D2N9 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps33aQ9D2N9 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps33aQ9D2N9 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps33aQ9D2N9 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vps33aQ9D2N9 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vps33aQ9D2N9 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.85■□□□□ 0.45
Vps33aQ9D2N9 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Vps33aQ9D2N9 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Vps33aQ9D2N9 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Vps33aQ9D2N9 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Vps33aQ9D2N9 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vps33aQ9D2N9 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.85■□□□□ 0.45
Vps33aQ9D2N9 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vps33aQ9D2N9 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vps33aQ9D2N9 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Vps33aQ9D2N9 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.85■□□□□ 0.45
Vps33aQ9D2N9 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps33aQ9D2N9 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Vps33aQ9D2N9 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps33aQ9D2N9 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps33aQ9D2N9 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.84■□□□□ 0.45
Vps33aQ9D2N9 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Vps33aQ9D2N9 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Vps33aQ9D2N9 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.84■□□□□ 0.45
Vps33aQ9D2N9 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps33aQ9D2N9 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Vps33aQ9D2N9 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps33aQ9D2N9 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps33aQ9D2N9 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps33aQ9D2N9 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps33aQ9D2N9 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps33aQ9D2N9 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps33aQ9D2N9 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps33aQ9D2N9 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps33aQ9D2N9 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Vps33aQ9D2N9 Gm37912-201ENSMUST00000191895 3076 ntBASIC17.83■□□□□ 0.45
Vps33aQ9D2N9 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Vps33aQ9D2N9 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Vps33aQ9D2N9 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Vps33aQ9D2N9 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Vps33aQ9D2N9 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Vps33aQ9D2N9 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.83■□□□□ 0.44
Vps33aQ9D2N9 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Vps33aQ9D2N9 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms