Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps28Q9D1C8 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Vps28Q9D1C8 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Vps28Q9D1C8 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Vps28Q9D1C8 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.23■□□□□ 0.35
Vps28Q9D1C8 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Vps28Q9D1C8 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Vps28Q9D1C8 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Vps28Q9D1C8 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps28Q9D1C8 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Vps28Q9D1C8 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps28Q9D1C8 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps28Q9D1C8 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps28Q9D1C8 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.23■□□□□ 0.35
Vps28Q9D1C8 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.23■□□□□ 0.35
Vps28Q9D1C8 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps28Q9D1C8 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps28Q9D1C8 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Vps28Q9D1C8 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps28Q9D1C8 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps28Q9D1C8 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps28Q9D1C8 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Vps28Q9D1C8 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps28Q9D1C8 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps28Q9D1C8 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps28Q9D1C8 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Vps28Q9D1C8 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps28Q9D1C8 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps28Q9D1C8 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps28Q9D1C8 Gm23634-201ENSMUST00000175071 91 ntBASIC17.22■□□□□ 0.35
Vps28Q9D1C8 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.22■□□□□ 0.35
Vps28Q9D1C8 Gm21559-201ENSMUST00000220638 855 ntBASIC17.22■□□□□ 0.35
Vps28Q9D1C8 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps28Q9D1C8 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps28Q9D1C8 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Vps28Q9D1C8 Gm8587-201ENSMUST00000076538 843 ntBASIC17.22■□□□□ 0.35
Vps28Q9D1C8 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Vps28Q9D1C8 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.22■□□□□ 0.35
Vps28Q9D1C8 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps28Q9D1C8 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Vps28Q9D1C8 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.22■□□□□ 0.35
Vps28Q9D1C8 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps28Q9D1C8 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps28Q9D1C8 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.22■□□□□ 0.35
Vps28Q9D1C8 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Vps28Q9D1C8 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Vps28Q9D1C8 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps28Q9D1C8 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps28Q9D1C8 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps28Q9D1C8 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps28Q9D1C8 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps28Q9D1C8 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps28Q9D1C8 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps28Q9D1C8 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps28Q9D1C8 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Vps28Q9D1C8 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps28Q9D1C8 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Vps28Q9D1C8 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Vps28Q9D1C8 Gm27000-201ENSMUST00000182943 842 ntBASIC17.21■□□□□ 0.35
Vps28Q9D1C8 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Vps28Q9D1C8 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps28Q9D1C8 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps28Q9D1C8 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps28Q9D1C8 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Vps28Q9D1C8 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps28Q9D1C8 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Vps28Q9D1C8 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps28Q9D1C8 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Vps28Q9D1C8 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps28Q9D1C8 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps28Q9D1C8 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Vps28Q9D1C8 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps28Q9D1C8 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps28Q9D1C8 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps28Q9D1C8 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps28Q9D1C8 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Vps28Q9D1C8 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps28Q9D1C8 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps28Q9D1C8 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps28Q9D1C8 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Vps28Q9D1C8 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps28Q9D1C8 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps28Q9D1C8 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.2■□□□□ 0.34
Vps28Q9D1C8 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.2■□□□□ 0.34
Vps28Q9D1C8 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps28Q9D1C8 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.2■□□□□ 0.34
Vps28Q9D1C8 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps28Q9D1C8 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps28Q9D1C8 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps28Q9D1C8 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps28Q9D1C8 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps28Q9D1C8 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps28Q9D1C8 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.19■□□□□ 0.34
Vps28Q9D1C8 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps28Q9D1C8 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.19■□□□□ 0.34
Vps28Q9D1C8 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.19■□□□□ 0.34
Vps28Q9D1C8 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Vps28Q9D1C8 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps28Q9D1C8 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Vps28Q9D1C8 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms