Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC11.11□□□□□ -0.63
Mrpl55Q9CZ83 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Mrpl55Q9CZ83 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Mrpl55Q9CZ83 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Mrpl55Q9CZ83 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Mrpl55Q9CZ83 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Mrpl55Q9CZ83 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC11.11□□□□□ -0.63
Mrpl55Q9CZ83 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Mrpl55Q9CZ83 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Mrpl55Q9CZ83 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC11.11□□□□□ -0.63
Mrpl55Q9CZ83 AC140264.2-202ENSMUST00000218746 817 ntBASIC11.11□□□□□ -0.63
Mrpl55Q9CZ83 Arhgef33-211ENSMUST00000225658 473 ntBASIC11.11□□□□□ -0.63
Mrpl55Q9CZ83 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Mrpl55Q9CZ83 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Mrpl55Q9CZ83 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Mrpl55Q9CZ83 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Mrpl55Q9CZ83 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Mrpl55Q9CZ83 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Mrpl55Q9CZ83 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Mrpl55Q9CZ83 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Mrpl55Q9CZ83 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Mrpl55Q9CZ83 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Mrpl55Q9CZ83 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Mrpl55Q9CZ83 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Mrpl55Q9CZ83 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Mrpl55Q9CZ83 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Mrpl55Q9CZ83 Hivep3-201ENSMUST00000084306 2973 ntBASIC11.1□□□□□ -0.63
Mrpl55Q9CZ83 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC11.1□□□□□ -0.63
Mrpl55Q9CZ83 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Mrpl55Q9CZ83 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Mrpl55Q9CZ83 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Mrpl55Q9CZ83 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Mrpl55Q9CZ83 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Mrpl55Q9CZ83 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Mrpl55Q9CZ83 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Mrpl55Q9CZ83 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Mrpl55Q9CZ83 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Mrpl55Q9CZ83 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Mrpl55Q9CZ83 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Mrpl55Q9CZ83 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Mrpl55Q9CZ83 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Mrpl55Q9CZ83 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Mrpl55Q9CZ83 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Mrpl55Q9CZ83 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Mrpl55Q9CZ83 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Mrpl55Q9CZ83 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Mrpl55Q9CZ83 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Mrpl55Q9CZ83 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Mrpl55Q9CZ83 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Mrpl55Q9CZ83 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Mrpl55Q9CZ83 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Mrpl55Q9CZ83 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Mrpl55Q9CZ83 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC11.09□□□□□ -0.63
Mrpl55Q9CZ83 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Mrpl55Q9CZ83 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Mrpl55Q9CZ83 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Mrpl55Q9CZ83 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC11.09□□□□□ -0.63
Mrpl55Q9CZ83 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Mrpl55Q9CZ83 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Mrpl55Q9CZ83 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Mrpl55Q9CZ83 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC11.09□□□□□ -0.63
Mrpl55Q9CZ83 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
Mrpl55Q9CZ83 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Mrpl55Q9CZ83 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Mrpl55Q9CZ83 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC11.09□□□□□ -0.63
Mrpl55Q9CZ83 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Mrpl55Q9CZ83 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Mrpl55Q9CZ83 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Mrpl55Q9CZ83 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Mrpl55Q9CZ83 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC11.09□□□□□ -0.63
Mrpl55Q9CZ83 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Mrpl55Q9CZ83 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC11.09□□□□□ -0.63
Mrpl55Q9CZ83 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC11.09□□□□□ -0.63
Mrpl55Q9CZ83 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC11.09□□□□□ -0.63
Mrpl55Q9CZ83 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Mrpl55Q9CZ83 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Mrpl55Q9CZ83 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Mrpl55Q9CZ83 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Mrpl55Q9CZ83 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Mrpl55Q9CZ83 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Mrpl55Q9CZ83 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC11.09□□□□□ -0.63
Mrpl55Q9CZ83 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Mrpl55Q9CZ83 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Mrpl55Q9CZ83 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Mrpl55Q9CZ83 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Mrpl55Q9CZ83 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Mrpl55Q9CZ83 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Mrpl55Q9CZ83 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.08□□□□□ -0.63
Mrpl55Q9CZ83 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Mrpl55Q9CZ83 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Mrpl55Q9CZ83 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Mrpl55Q9CZ83 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Mrpl55Q9CZ83 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Mrpl55Q9CZ83 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Mrpl55Q9CZ83 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Mrpl55Q9CZ83 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Mrpl55Q9CZ83 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC11.08□□□□□ -0.64
Mrpl55Q9CZ83 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC11.08□□□□□ -0.64
Mrpl55Q9CZ83 Gm5643-201ENSMUST00000117081 966 ntBASIC11.08□□□□□ -0.64
Mrpl55Q9CZ83 Gm13158-201ENSMUST00000122007 736 ntBASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms