Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nip7Q9CXK8 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Nip7Q9CXK8 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Nip7Q9CXK8 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Nip7Q9CXK8 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Nip7Q9CXK8 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Nip7Q9CXK8 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Nip7Q9CXK8 AL590614.2-201ENSMUST00000225374 1937 ntBASIC20.89■□□□□ 0.93
Nip7Q9CXK8 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nip7Q9CXK8 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nip7Q9CXK8 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Nip7Q9CXK8 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC20.89■□□□□ 0.93
Nip7Q9CXK8 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC20.89■□□□□ 0.93
Nip7Q9CXK8 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC20.89■□□□□ 0.93
Nip7Q9CXK8 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nip7Q9CXK8 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nip7Q9CXK8 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nip7Q9CXK8 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nip7Q9CXK8 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nip7Q9CXK8 Gm15165-201ENSMUST00000118140 502 ntBASIC20.88■□□□□ 0.93
Nip7Q9CXK8 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Nip7Q9CXK8 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
Nip7Q9CXK8 Gm6296-201ENSMUST00000222599 943 ntBASIC20.88■□□□□ 0.93
Nip7Q9CXK8 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nip7Q9CXK8 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nip7Q9CXK8 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Nip7Q9CXK8 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nip7Q9CXK8 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nip7Q9CXK8 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nip7Q9CXK8 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nip7Q9CXK8 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nip7Q9CXK8 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Nip7Q9CXK8 Gm45203-201ENSMUST00000206384 1831 ntBASIC20.88■□□□□ 0.93
Nip7Q9CXK8 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Nip7Q9CXK8 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nip7Q9CXK8 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nip7Q9CXK8 Gm44454-201ENSMUST00000198541 138 ntBASIC20.87■□□□□ 0.93
Nip7Q9CXK8 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Nip7Q9CXK8 Gm44430-201ENSMUST00000203376 995 ntBASIC20.87■□□□□ 0.93
Nip7Q9CXK8 Gm2651-201ENSMUST00000203560 838 ntBASIC20.87■□□□□ 0.93
Nip7Q9CXK8 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
Nip7Q9CXK8 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nip7Q9CXK8 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.87■□□□□ 0.93
Nip7Q9CXK8 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC20.87■□□□□ 0.93
Nip7Q9CXK8 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nip7Q9CXK8 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nip7Q9CXK8 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Nip7Q9CXK8 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nip7Q9CXK8 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Nip7Q9CXK8 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.86■□□□□ 0.93
Nip7Q9CXK8 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Nip7Q9CXK8 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Nip7Q9CXK8 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Nip7Q9CXK8 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.86■□□□□ 0.93
Nip7Q9CXK8 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Nip7Q9CXK8 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Nip7Q9CXK8 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nip7Q9CXK8 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Nip7Q9CXK8 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nip7Q9CXK8 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC20.86■□□□□ 0.93
Nip7Q9CXK8 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Nip7Q9CXK8 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Nip7Q9CXK8 Gm18206-201ENSMUST00000207027 926 ntBASIC20.86■□□□□ 0.93
Nip7Q9CXK8 Gm6376-201ENSMUST00000209407 580 ntBASIC20.86■□□□□ 0.93
Nip7Q9CXK8 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC20.86■□□□□ 0.93
Nip7Q9CXK8 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nip7Q9CXK8 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nip7Q9CXK8 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nip7Q9CXK8 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nip7Q9CXK8 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
Nip7Q9CXK8 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nip7Q9CXK8 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nip7Q9CXK8 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC20.85■□□□□ 0.93
Nip7Q9CXK8 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Nip7Q9CXK8 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nip7Q9CXK8 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Nip7Q9CXK8 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Nip7Q9CXK8 Gm27525-201ENSMUST00000184465 107 ntBASIC20.85■□□□□ 0.93
Nip7Q9CXK8 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC20.85■□□□□ 0.93
Nip7Q9CXK8 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
Nip7Q9CXK8 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nip7Q9CXK8 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Nip7Q9CXK8 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nip7Q9CXK8 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nip7Q9CXK8 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nip7Q9CXK8 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Nip7Q9CXK8 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20.85■□□□□ 0.93
Nip7Q9CXK8 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nip7Q9CXK8 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nip7Q9CXK8 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nip7Q9CXK8 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nip7Q9CXK8 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Nip7Q9CXK8 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nip7Q9CXK8 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Nip7Q9CXK8 Gm7862-201ENSMUST00000121461 292 ntBASIC20.84■□□□□ 0.93
Nip7Q9CXK8 Gm44357-201ENSMUST00000195897 142 ntBASIC20.84■□□□□ 0.93
Nip7Q9CXK8 Gm19658-201ENSMUST00000196231 138 ntBASIC20.84■□□□□ 0.93
Nip7Q9CXK8 Gm44367-201ENSMUST00000196836 138 ntBASIC20.84■□□□□ 0.93
Nip7Q9CXK8 Gm44350-201ENSMUST00000197197 138 ntBASIC20.84■□□□□ 0.93
Nip7Q9CXK8 Gm44390-201ENSMUST00000197533 144 ntBASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms