Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Lrrc40Q9CRC8 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lrrc40Q9CRC8 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lrrc40Q9CRC8 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Lrrc40Q9CRC8 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lrrc40Q9CRC8 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lrrc40Q9CRC8 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lrrc40Q9CRC8 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.69■□□□□ 0.26
Lrrc40Q9CRC8 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lrrc40Q9CRC8 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.69■□□□□ 0.26
Lrrc40Q9CRC8 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lrrc40Q9CRC8 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lrrc40Q9CRC8 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lrrc40Q9CRC8 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.68■□□□□ 0.26
Lrrc40Q9CRC8 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Lrrc40Q9CRC8 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Lrrc40Q9CRC8 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lrrc40Q9CRC8 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lrrc40Q9CRC8 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Lrrc40Q9CRC8 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.68■□□□□ 0.26
Lrrc40Q9CRC8 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lrrc40Q9CRC8 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lrrc40Q9CRC8 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lrrc40Q9CRC8 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Lrrc40Q9CRC8 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lrrc40Q9CRC8 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Lrrc40Q9CRC8 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.68■□□□□ 0.26
Lrrc40Q9CRC8 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Lrrc40Q9CRC8 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lrrc40Q9CRC8 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Lrrc40Q9CRC8 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lrrc40Q9CRC8 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.68■□□□□ 0.26
Lrrc40Q9CRC8 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lrrc40Q9CRC8 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lrrc40Q9CRC8 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lrrc40Q9CRC8 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Lrrc40Q9CRC8 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.67■□□□□ 0.26
Lrrc40Q9CRC8 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Lrrc40Q9CRC8 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lrrc40Q9CRC8 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lrrc40Q9CRC8 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lrrc40Q9CRC8 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lrrc40Q9CRC8 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lrrc40Q9CRC8 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.67■□□□□ 0.26
Lrrc40Q9CRC8 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lrrc40Q9CRC8 Mir5122-201ENSMUST00000175004 89 ntBASIC16.67■□□□□ 0.26
Lrrc40Q9CRC8 Gm27463-201ENSMUST00000183569 57 ntBASIC16.67■□□□□ 0.26
Lrrc40Q9CRC8 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Lrrc40Q9CRC8 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lrrc40Q9CRC8 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Lrrc40Q9CRC8 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lrrc40Q9CRC8 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Lrrc40Q9CRC8 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lrrc40Q9CRC8 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
Lrrc40Q9CRC8 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lrrc40Q9CRC8 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lrrc40Q9CRC8 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Lrrc40Q9CRC8 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lrrc40Q9CRC8 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Lrrc40Q9CRC8 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Lrrc40Q9CRC8 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Lrrc40Q9CRC8 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lrrc40Q9CRC8 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lrrc40Q9CRC8 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lrrc40Q9CRC8 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lrrc40Q9CRC8 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lrrc40Q9CRC8 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lrrc40Q9CRC8 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.66■□□□□ 0.26
Lrrc40Q9CRC8 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lrrc40Q9CRC8 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.66■□□□□ 0.26
Lrrc40Q9CRC8 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.66■□□□□ 0.26
Lrrc40Q9CRC8 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.66■□□□□ 0.26
Lrrc40Q9CRC8 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.66■□□□□ 0.26
Lrrc40Q9CRC8 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Lrrc40Q9CRC8 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.66■□□□□ 0.26
Lrrc40Q9CRC8 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lrrc40Q9CRC8 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lrrc40Q9CRC8 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Lrrc40Q9CRC8 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Lrrc40Q9CRC8 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.66■□□□□ 0.26
Lrrc40Q9CRC8 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Lrrc40Q9CRC8 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lrrc40Q9CRC8 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Lrrc40Q9CRC8 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lrrc40Q9CRC8 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lrrc40Q9CRC8 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lrrc40Q9CRC8 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Lrrc40Q9CRC8 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lrrc40Q9CRC8 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Lrrc40Q9CRC8 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lrrc40Q9CRC8 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lrrc40Q9CRC8 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lrrc40Q9CRC8 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.65■□□□□ 0.26
Lrrc40Q9CRC8 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.65■□□□□ 0.26
Lrrc40Q9CRC8 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.65■□□□□ 0.26
Lrrc40Q9CRC8 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lrrc40Q9CRC8 Gm27011-201ENSMUST00000182352 972 ntBASIC16.65■□□□□ 0.26
Lrrc40Q9CRC8 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.65■□□□□ 0.26
Lrrc40Q9CRC8 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lrrc40Q9CRC8 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms