Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.78■□□□□ 0.44
Rpa3Q9CQ71 Gm16061-201ENSMUST00000122167 857 ntBASIC17.78■□□□□ 0.44
Rpa3Q9CQ71 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.78■□□□□ 0.44
Rpa3Q9CQ71 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Rpa3Q9CQ71 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rpa3Q9CQ71 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Rpa3Q9CQ71 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rpa3Q9CQ71 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rpa3Q9CQ71 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rpa3Q9CQ71 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Rpa3Q9CQ71 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.77■□□□□ 0.44
Rpa3Q9CQ71 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rpa3Q9CQ71 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rpa3Q9CQ71 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.77■□□□□ 0.44
Rpa3Q9CQ71 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
Rpa3Q9CQ71 Gm13474-201ENSMUST00000122466 815 ntBASIC17.77■□□□□ 0.44
Rpa3Q9CQ71 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.77■□□□□ 0.44
Rpa3Q9CQ71 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Rpa3Q9CQ71 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.77■□□□□ 0.44
Rpa3Q9CQ71 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.77■□□□□ 0.44
Rpa3Q9CQ71 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rpa3Q9CQ71 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rpa3Q9CQ71 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rpa3Q9CQ71 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rpa3Q9CQ71 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rpa3Q9CQ71 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.77■□□□□ 0.43
Rpa3Q9CQ71 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Rpa3Q9CQ71 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rpa3Q9CQ71 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rpa3Q9CQ71 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rpa3Q9CQ71 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Rpa3Q9CQ71 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Rpa3Q9CQ71 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rpa3Q9CQ71 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Rpa3Q9CQ71 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rpa3Q9CQ71 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rpa3Q9CQ71 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.76■□□□□ 0.43
Rpa3Q9CQ71 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rpa3Q9CQ71 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.76■□□□□ 0.43
Rpa3Q9CQ71 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rpa3Q9CQ71 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rpa3Q9CQ71 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.76■□□□□ 0.43
Rpa3Q9CQ71 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Rpa3Q9CQ71 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rpa3Q9CQ71 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rpa3Q9CQ71 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Rpa3Q9CQ71 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.75■□□□□ 0.43
Rpa3Q9CQ71 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Rpa3Q9CQ71 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rpa3Q9CQ71 Gm7889-201ENSMUST00000185591 958 ntBASIC17.75■□□□□ 0.43
Rpa3Q9CQ71 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rpa3Q9CQ71 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rpa3Q9CQ71 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Rpa3Q9CQ71 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rpa3Q9CQ71 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rpa3Q9CQ71 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rpa3Q9CQ71 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rpa3Q9CQ71 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rpa3Q9CQ71 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rpa3Q9CQ71 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.74■□□□□ 0.43
Rpa3Q9CQ71 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.74■□□□□ 0.43
Rpa3Q9CQ71 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rpa3Q9CQ71 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rpa3Q9CQ71 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
Rpa3Q9CQ71 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Rpa3Q9CQ71 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rpa3Q9CQ71 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Rpa3Q9CQ71 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.74■□□□□ 0.43
Rpa3Q9CQ71 Gm7370-201ENSMUST00000219471 767 ntBASIC17.74■□□□□ 0.43
Rpa3Q9CQ71 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rpa3Q9CQ71 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rpa3Q9CQ71 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.74■□□□□ 0.43
Rpa3Q9CQ71 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.74■□□□□ 0.43
Rpa3Q9CQ71 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rpa3Q9CQ71 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rpa3Q9CQ71 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rpa3Q9CQ71 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Rpa3Q9CQ71 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rpa3Q9CQ71 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rpa3Q9CQ71 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rpa3Q9CQ71 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rpa3Q9CQ71 Gm6433-201ENSMUST00000118634 875 ntBASIC17.73■□□□□ 0.43
Rpa3Q9CQ71 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.73■□□□□ 0.43
Rpa3Q9CQ71 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rpa3Q9CQ71 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Rpa3Q9CQ71 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.73■□□□□ 0.43
Rpa3Q9CQ71 Gm18959-201ENSMUST00000208954 655 ntBASIC17.73■□□□□ 0.43
Rpa3Q9CQ71 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
Rpa3Q9CQ71 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rpa3Q9CQ71 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rpa3Q9CQ71 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rpa3Q9CQ71 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rpa3Q9CQ71 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.73■□□□□ 0.43
Rpa3Q9CQ71 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rpa3Q9CQ71 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.72■□□□□ 0.43
Rpa3Q9CQ71 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpa3Q9CQ71 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpa3Q9CQ71 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Rpa3Q9CQ71 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpa3Q9CQ71 Mir5130-201ENSMUST00000175160 84 ntBASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms