Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H2afb1Q9CQ70 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC13.76□□□□□ -0.21
H2afb1Q9CQ70 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
H2afb1Q9CQ70 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
H2afb1Q9CQ70 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
H2afb1Q9CQ70 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
H2afb1Q9CQ70 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
H2afb1Q9CQ70 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
H2afb1Q9CQ70 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
H2afb1Q9CQ70 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
H2afb1Q9CQ70 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
H2afb1Q9CQ70 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
H2afb1Q9CQ70 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC13.75□□□□□ -0.21
H2afb1Q9CQ70 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
H2afb1Q9CQ70 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
H2afb1Q9CQ70 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
H2afb1Q9CQ70 Gm13168-201ENSMUST00000121771 632 ntBASIC13.75□□□□□ -0.21
H2afb1Q9CQ70 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
H2afb1Q9CQ70 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
H2afb1Q9CQ70 Timm23-208ENSMUST00000226683 750 ntBASIC13.75□□□□□ -0.21
H2afb1Q9CQ70 AC154649.1-201ENSMUST00000227392 384 ntBASIC13.75□□□□□ -0.21
H2afb1Q9CQ70 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
H2afb1Q9CQ70 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
H2afb1Q9CQ70 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC13.75□□□□□ -0.21
H2afb1Q9CQ70 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
H2afb1Q9CQ70 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
H2afb1Q9CQ70 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.75□□□□□ -0.21
H2afb1Q9CQ70 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
H2afb1Q9CQ70 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
H2afb1Q9CQ70 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC13.75□□□□□ -0.21
H2afb1Q9CQ70 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
H2afb1Q9CQ70 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
H2afb1Q9CQ70 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
H2afb1Q9CQ70 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
H2afb1Q9CQ70 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb1Q9CQ70 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb1Q9CQ70 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb1Q9CQ70 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb1Q9CQ70 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb1Q9CQ70 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
H2afb1Q9CQ70 Gm28265-201ENSMUST00000188201 2319 ntBASIC13.74□□□□□ -0.21
H2afb1Q9CQ70 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb1Q9CQ70 Gm26596-201ENSMUST00000180464 2655 ntBASIC13.74□□□□□ -0.21
H2afb1Q9CQ70 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb1Q9CQ70 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb1Q9CQ70 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb1Q9CQ70 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb1Q9CQ70 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
H2afb1Q9CQ70 Gm12669-201ENSMUST00000122162 1009 ntBASIC13.74□□□□□ -0.21
H2afb1Q9CQ70 Gm27000-201ENSMUST00000182943 842 ntBASIC13.74□□□□□ -0.21
H2afb1Q9CQ70 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC13.74□□□□□ -0.21
H2afb1Q9CQ70 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC13.74□□□□□ -0.21
H2afb1Q9CQ70 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb1Q9CQ70 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb1Q9CQ70 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
H2afb1Q9CQ70 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb1Q9CQ70 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb1Q9CQ70 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
H2afb1Q9CQ70 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb1Q9CQ70 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC13.74□□□□□ -0.21
H2afb1Q9CQ70 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
H2afb1Q9CQ70 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb1Q9CQ70 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
H2afb1Q9CQ70 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
H2afb1Q9CQ70 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
H2afb1Q9CQ70 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
H2afb1Q9CQ70 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
H2afb1Q9CQ70 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
H2afb1Q9CQ70 Mir1199-201ENSMUST00000117015 119 ntBASIC13.73□□□□□ -0.21
H2afb1Q9CQ70 Gm13181-201ENSMUST00000120117 1069 ntBASIC13.73□□□□□ -0.21
H2afb1Q9CQ70 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC13.73□□□□□ -0.21
H2afb1Q9CQ70 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
H2afb1Q9CQ70 Gm8520-201ENSMUST00000186517 868 ntBASIC13.73□□□□□ -0.21
H2afb1Q9CQ70 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC13.73□□□□□ -0.21
H2afb1Q9CQ70 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
H2afb1Q9CQ70 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
H2afb1Q9CQ70 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
H2afb1Q9CQ70 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
H2afb1Q9CQ70 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.73□□□□□ -0.21
H2afb1Q9CQ70 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
H2afb1Q9CQ70 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
H2afb1Q9CQ70 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
H2afb1Q9CQ70 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
H2afb1Q9CQ70 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
H2afb1Q9CQ70 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
H2afb1Q9CQ70 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
H2afb1Q9CQ70 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb1Q9CQ70 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
H2afb1Q9CQ70 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb1Q9CQ70 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb1Q9CQ70 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb1Q9CQ70 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb1Q9CQ70 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
H2afb1Q9CQ70 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
H2afb1Q9CQ70 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb1Q9CQ70 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb1Q9CQ70 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
H2afb1Q9CQ70 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
H2afb1Q9CQ70 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC13.72□□□□□ -0.21
H2afb1Q9CQ70 Gm16042-201ENSMUST00000204813 1247 ntBASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 112.9 ms