Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.47■□□□□ 0.23
Trim16Q99PP9 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim16Q99PP9 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim16Q99PP9 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Trim16Q99PP9 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Trim16Q99PP9 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.46■□□□□ 0.23
Trim16Q99PP9 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim16Q99PP9 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.46■□□□□ 0.23
Trim16Q99PP9 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.46■□□□□ 0.23
Trim16Q99PP9 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trim16Q99PP9 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.46■□□□□ 0.23
Trim16Q99PP9 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim16Q99PP9 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim16Q99PP9 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim16Q99PP9 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim16Q99PP9 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Trim16Q99PP9 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim16Q99PP9 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.46■□□□□ 0.23
Trim16Q99PP9 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim16Q99PP9 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trim16Q99PP9 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.45■□□□□ 0.22
Trim16Q99PP9 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim16Q99PP9 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trim16Q99PP9 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim16Q99PP9 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Trim16Q99PP9 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim16Q99PP9 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.45■□□□□ 0.22
Trim16Q99PP9 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim16Q99PP9 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim16Q99PP9 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim16Q99PP9 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim16Q99PP9 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim16Q99PP9 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim16Q99PP9 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.45■□□□□ 0.22
Trim16Q99PP9 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim16Q99PP9 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Trim16Q99PP9 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.45■□□□□ 0.22
Trim16Q99PP9 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim16Q99PP9 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Trim16Q99PP9 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim16Q99PP9 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trim16Q99PP9 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim16Q99PP9 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim16Q99PP9 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim16Q99PP9 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim16Q99PP9 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim16Q99PP9 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim16Q99PP9 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim16Q99PP9 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim16Q99PP9 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim16Q99PP9 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim16Q99PP9 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trim16Q99PP9 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.44■□□□□ 0.22
Trim16Q99PP9 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.44■□□□□ 0.22
Trim16Q99PP9 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trim16Q99PP9 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
Trim16Q99PP9 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.44■□□□□ 0.22
Trim16Q99PP9 Mir5122-201ENSMUST00000175004 89 ntBASIC16.44■□□□□ 0.22
Trim16Q99PP9 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trim16Q99PP9 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Trim16Q99PP9 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trim16Q99PP9 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim16Q99PP9 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.44■□□□□ 0.22
Trim16Q99PP9 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim16Q99PP9 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim16Q99PP9 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim16Q99PP9 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trim16Q99PP9 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim16Q99PP9 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trim16Q99PP9 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim16Q99PP9 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Trim16Q99PP9 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim16Q99PP9 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim16Q99PP9 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim16Q99PP9 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim16Q99PP9 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.44■□□□□ 0.22
Trim16Q99PP9 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.43■□□□□ 0.22
Trim16Q99PP9 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.43■□□□□ 0.22
Trim16Q99PP9 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim16Q99PP9 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim16Q99PP9 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.43■□□□□ 0.22
Trim16Q99PP9 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim16Q99PP9 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim16Q99PP9 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.43■□□□□ 0.22
Trim16Q99PP9 Gm10252-201ENSMUST00000209541 832 ntBASIC16.43■□□□□ 0.22
Trim16Q99PP9 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Trim16Q99PP9 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.43■□□□□ 0.22
Trim16Q99PP9 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim16Q99PP9 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim16Q99PP9 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim16Q99PP9 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim16Q99PP9 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim16Q99PP9 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim16Q99PP9 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim16Q99PP9 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.43■□□□□ 0.22
Trim16Q99PP9 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim16Q99PP9 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim16Q99PP9 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Trim16Q99PP9 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim16Q99PP9 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms